http://ssbd.qbic.riken.jp/ has been obsoleted on 2020/12/24, but is accessible for backward compatibility.
Please visit the new site https://ssbd.riken.jp/.
Introduction
Systems Science of Biological Dynamics database (SSBD:database) provides a rich set of open resources for analyzing quantitative data and microscopy images of biological objects, such as single-molecule, cell, gene expression nuclei, etc. Quantitative biological data and microscopy image are collected from a variety of species, sources and methods. These include data obtained from both experiment and computational simulation.
Samples
Quantitative data
Nuclear division dynamics in D. rerio wild-type embryo |
Nuclear division dynamics in C. elegans wild-type embryo |
Single molecule dynamics in E. coli wild-type |
News and Events
- Nov. 25. 2020: System maintenance
We will be performing some maintenance work on the SSBD:database this week (2020-11-25). You may experience some service outage from time to time.
- Aug. 12. 2020: A new paper on BD5 is published in PLOS ONE
A new paper "BD5: an open HDF5-based data format to represent quantitative biological dynamics data" is now published in PLOS ONE. https://doi.org/10.1371/journal.pone.0237468
- Older news ...
Information
- OMERO version 5.4.10: Images can be viewed on OMERO.web. If you have problem viewing the images on the website, please click on the drop-down arrow on the right of 'public data' on the bar above the data tree, select 'Public' group and 'public data' to view the images (click here for more details).
- OMERO session ID: None
Links
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Funding