≫ Archive Data

Summary of BDML data

BDML ID744531d5-02d6-4892-b8a6-6fdad30aefc1 (schema: 3.000, status: available)
TitleBDML file for the result of the Monte Carlo computer simulation of nucleosome dynamics in EGFP-pentamers (parameters: 13 nm spheres representing EGFP-pentamers in fixed 0.5 mM 10 nm spheres representing a nucleosome)
LicenseCC BY license
Descriptionthe result of the Monte Carlo computer simulation of nucleosome dynamics in EGFP-pentamers (parameters: 13 nm spheres representing EGFP-pentamers in fixed 0.5 mM 10 nm spheres representing a nucleosome)
OrganismNone
Datatypesingle molecule dynamics
Local IDnuc_0.5_0
Basedon Simulation
Contributors Saera Hihara, Chan-Gi Pack, Kazunari Kaizu, Tomomi Tani, Tomo Hanafusa, Tadasu Nozaki, Satoko Takemoto, Tomohiko Yoshimi, Hideo Yokota, Naoko Imamoto, Yasushi Sako, Masataka Kinjo, Koichi Takahashi, Takeharu Nagai, Kazuhiro Maeshima
PubMed ID23246002
Contact InformationKoichi Takahashi, RIKEN, Quantitative Biology Center, Laboratory for Biochemical Simulation
Summary of methodsSee details in Hihara et al. (2012) Cell Reports, 2(6): 1645-1656.
SourceNone
BDML filehttp://ssbd.qbic.riken.jp/data/44-Hihara-NucleosomeDyn/bdml/nuc_0.5_0_bdml3.0.zip (md5)
PDPMLNone

Summary of Images

No data.