public class OMEROMetadataStoreClient extends java.lang.Object implements loci.formats.meta.MetadataStore, loci.formats.meta.IMinMaxStore, IObjectContainerStore
MetadataStore
. It is
responsible for handling metadata from Bio-Formats and maintaining
communication with an OMERO server.修飾子とタイプ | フィールドと説明 |
---|---|
static java.lang.String |
OMERO_EMISSION_FILTER_SUFFIX
Emission filter LSID suffix.
|
static java.lang.String |
OMERO_EXCITATION_FILTER_SUFFIX
Excitation filter LSID suffix.
|
コンストラクタと説明 |
---|
OMEROMetadataStoreClient() |
修飾子とタイプ | メソッドと説明 |
---|---|
omero.model.Dataset |
addDataset(java.lang.String datasetName,
java.lang.String datasetDescription,
omero.model.Project project) |
boolean |
addModelProcessor(ModelProcessor processor)
Adds a model processor to the end of the processing chain.
|
omero.model.Project |
addProject(java.lang.String projectName,
java.lang.String projectDescription) |
void |
addReference(ome.util.LSID source,
ome.util.LSID target)
Adds a reference to the reference cache.
|
omero.model.Screen |
addScreen(java.lang.String screenName,
java.lang.String screenDescription) |
void |
attachCompanionFilesToImage(omero.model.Fileset fs,
java.util.List<omero.model.Image> imageList)
Uses the
reader object to obtain
a list of companion files from the current image. |
void |
closeServices()
Closes all stateful services.
|
int |
countCachedContainers(java.lang.Class<? extends omero.model.IObject> klass,
int... indexes)
Counts the number of containers the MetadataStore has of a given class
and at a given index of the hierarchy if specified.
|
int |
countCachedReferences(java.lang.Class<? extends omero.model.IObject> source,
java.lang.Class<? extends omero.model.IObject> target)
Counts the number of references the MetadataStore has between objects
of two classes.
|
void |
createRoot() |
void |
finalizePixelStore()
Closes the active raw pixels store.
|
java.util.Map<java.lang.Class<? extends omero.model.IObject>,java.util.Map<java.lang.String,omero.metadatastore.IObjectContainer>> |
getAuthoritativeContainerCache()
Returns the current authoritative LSID container cache.
|
omero.model.Channel |
getChannel(int imageIndex,
int channelIndex) |
java.lang.String |
getConfigValue(java.lang.String key)
Retrieves a configuration value from the
IConfig service. |
java.util.Map<ome.util.LSID,omero.metadatastore.IObjectContainer> |
getContainerCache()
Returns the current container cache.
|
java.util.List<omero.model.Dataset> |
getDatasets(omero.model.Project p) |
java.util.List<omero.model.Dataset> |
getDatasetsWithoutProjects() |
int |
getDefaultBatchSize() |
int |
getDefaultBlockSize() |
int |
getDefaultGroupLevel()
Retrieve the default group's permission 'level'.
|
java.lang.String |
getDefaultGroupName()
Retrieve the default group's name
|
omero.model.Detector |
getDetector(int instrumentIndex,
int detectorIndex) |
EnumerationProvider |
getEnumerationProvider()
Retrieves the active enumeration provider.
|
long |
getExperimenterID() |
omero.model.Filament |
getFilament(int instrumentIndex,
int lightSourceIndex) |
omero.model.FilterSet |
getFilterSet(int instrumentIndex,
int filterSetIndex) |
omero.model.ImagingEnvironment |
getImagingEnvironment(int imageIndex) |
InstanceProvider |
getInstanceProvider()
Retrieves the active enumeration provider.
|
omero.metadatastore.IObjectContainer |
getIObjectContainer(java.lang.Class<? extends omero.model.IObject> klass,
java.util.LinkedHashMap<Index,java.lang.Integer> indexes)
Retrieves an IObject container for a given class and location within the
OME-XML data model.
|
java.util.List<omero.metadatastore.IObjectContainer> |
getIObjectContainers(java.lang.Class<? extends omero.model.IObject> klass)
Retrieves all IObject containers of a given class.
|
omero.api.IQueryPrx |
getIQuery() |
ClientKeepAlive |
getKeepAlive()
Returns clientKeepAlive created in store
|
omero.model.Laser |
getLaser(int instrumentIndex,
int lightSourceIndex) |
omero.model.LightEmittingDiode |
getLightEmittingDiode(int instrumentIndex,
int lightSourceIndex) |
omero.model.Line |
getLine(int ROIIndex,
int shapeIndex) |
omero.model.ListAnnotation |
getListAnnotation(int listAnnotationIndex) |
omero.model.LongAnnotation |
getLongAnnotation(int longAnnotationIndex) |
omero.model.Mask |
getMask(int ROIIndex,
int shapeIndex) |
omero.model.MicrobeamManipulation |
getMicrobeamManipulation(int experimentIndex,
int microbeamManipulationIndex) |
omero.model.LightSettings |
getMicrobeamManipulationLightSourceSettings(int experimentIndex,
int microbeamManipulationIndex,
int lightSourceSettingsIndex) |
java.util.List<ModelProcessor> |
getModelProcessors()
Retrieves the current list of model processors the metadata store is
using.
|
omero.model.Objective |
getObjective(int instrumentIndex,
int objectiveIndex) |
omero.model.ObjectiveSettings |
getObjectiveSettings(int imageIndex) |
omero.model.Project |
getProject(long projectId) |
java.util.List<omero.model.Project> |
getProjects() |
loci.formats.IFormatReader |
getReader()
Returns the current Bio-Formats reader that has been used to populate
the container store.
|
java.util.Map<ome.util.LSID,java.util.List<ome.util.LSID>> |
getReferenceCache()
Returns the current reference cache.
|
java.util.Map<java.lang.String,java.lang.String[]> |
getReferenceStringCache()
Returns the current string based reference cache.
|
long |
getRepositorySpace() |
ome.xml.meta.MetadataRoot |
getRoot() |
java.util.List<omero.model.Screen> |
getScreens() |
omero.api.ServiceFactoryPrx |
getServiceFactory()
Returns the currently active service factory.
|
omero.model.IObject |
getSourceObject(ome.util.LSID LSID)
Retrieves an OMERO Blitz source object for a given LSID.
|
<T extends omero.model.IObject> |
getSourceObjects(java.lang.Class<T> klass)
Retrieves all OMERO Blitz source objects of a given class.
|
<T extends omero.model.IObject> |
getTarget(java.lang.Class<T> klass,
long id)
Helper method to retrieve an object from iQuery
|
int[] |
getTileSize(java.lang.Long pixId)
Retrieves the suggested tile size for a pixels set.
|
java.util.List<omero.model.Annotation> |
getUserSpecifiedAnnotations()
Returns the user specified annotations.
|
java.lang.String |
getUserSpecifiedDescription()
Returns the user specified image/plate description.
|
java.lang.String |
getUserSpecifiedImageName() |
java.lang.String |
getUserSpecifiedName()
Returns the user specified image/plate name.
|
java.lang.Double[] |
getUserSpecifiedPhysicalPixelSizes()
Returns the user specified physical pixel sizes.
|
omero.model.IObject |
getUserSpecifiedTarget()
Returns the user specified linkage target (usually a Dataset for Images
and a Screen for Plates).
|
boolean |
hasReference(ome.util.LSID source,
ome.util.LSID target)
Checks to see if there is currently an active reference for two LSIDs.
|
void |
initialize(client c)
Initializes the MetadataStore with an already logged in, ready to go
service factory.
|
void |
initialize(omero.api.ServiceFactoryPrx serviceFactory)
Initializes the MetadataStore with an already logged in, ready to go
service factory.
|
void |
initialize(java.lang.String server,
int port,
java.lang.String sessionKey)
Initializes the MetadataStore by joining an existing session.
|
void |
initialize(java.lang.String server,
int port,
java.lang.String sessionKey,
boolean isSecure)
Initializes the MetadataStore by joining an existing session.
|
void |
initialize(java.lang.String username,
java.lang.String password,
java.lang.String server,
int port)
Initializes the MetadataStore taking string parameters to feed to the
OMERO Blitz client object.
|
void |
initialize(java.lang.String username,
java.lang.String password,
java.lang.String server,
int port,
boolean isSecure)
Initializes the MetadataStore taking string parameters to feed to the
OMERO Blitz client object.
|
void |
initialize(java.lang.String username,
java.lang.String password,
java.lang.String server,
int port,
java.lang.Long group,
boolean isSecure)
Initializes the MetadataStore taking string parameters to feed to the
OMERO Blitz client object.
|
boolean |
isEncryptedConnection() |
java.util.List<omero.grid.InteractiveProcessorPrx> |
launchProcessing() |
void |
logout()
Destroys the sessionFactory and closes the client.
|
void |
logVersionInfo(java.lang.String clientVersion) |
java.util.Map<java.lang.Long,java.lang.String> |
mapUserGroups()
Maps the user's groups for use by ScreenLogin.registerGroup()
Also strips system groups from this map
|
void |
ping()
Pings all registered OMERO Blitz proxies.
|
void |
populateMinMax()
Sends all the minimums and maximums for all images processed so far to
the server.
|
void |
postProcess()
Post processes the internal structure of the client side MetadataStore.
|
void |
prepare(java.util.Map<java.lang.Integer,omero.model.Image> existingMetadata)
Prepares the metadata store using existing metadata that has been
pre-registered by OMERO.fs.
|
void |
preparePixelsStore(java.util.List<java.lang.Long> pixelsIds)
Prepares the server side RawPixelsStore.
|
void |
removeIObjectContainer(ome.util.LSID lsid)
Removes an IObject container from within the OME-XML data model store.
|
void |
removeModelProcessor(ModelProcessor processor)
Removes a model processor from use.
|
void |
resetDefaultsAndGenerateThumbnails(java.util.List<java.lang.Long> plateIds,
java.util.List<java.lang.Long> pixelsIds)
Resets the defaults and generates thumbnails for a given set of Pixels
IDs.
|
java.util.Map<java.lang.String,java.util.List<omero.model.IObject>> |
saveToDB(omero.model.FilesetJobLink link)
Updates the server side MetadataStore with a list of our objects and
references and saves them into the database.
|
void |
setArcID(java.lang.String id,
int instrumentIndex,
int lightSourceIndex) |
void |
setArcLotNumber(java.lang.String lotNumber,
int instrumentIndex,
int lightSourceIndex) |
void |
setArcManufacturer(java.lang.String manufacturer,
int instrumentIndex,
int lightSourceIndex) |
void |
setArcModel(java.lang.String model,
int instrumentIndex,
int lightSourceIndex) |
void |
setArcPower(java.lang.Double power,
int instrumentIndex,
int lightSourceIndex) |
void |
setArcSerialNumber(java.lang.String serialNumber,
int instrumentIndex,
int lightSourceIndex) |
void |
setArcType(ome.xml.model.enums.ArcType type,
int instrumentIndex,
int lightSourceIndex) |
void |
setBinaryFileFileName(java.lang.String fileName,
int fileAnnotationIndex) |
void |
setBinaryFileMIMEType(java.lang.String mimeType,
int fileAnnotationIndex) |
void |
setBinaryFileSize(ome.xml.model.primitives.NonNegativeLong size,
int fileAnnotationIndex) |
void |
setBinaryOnlyMetadataFile(java.lang.String metadataFile) |
void |
setBinaryOnlyUUID(java.lang.String uuid) |
void |
setBooleanAnnotationAnnotationRef(java.lang.String annotation,
int booleanAnnotationIndex,
int annotationRefIndex) |
void |
setBooleanAnnotationAnnotator(java.lang.String value,
int index) |
void |
setBooleanAnnotationDescription(java.lang.String description,
int booleanAnnotationIndex) |
void |
setBooleanAnnotationID(java.lang.String id,
int booleanAnnotationIndex) |
void |
setBooleanAnnotationNamespace(java.lang.String namespace,
int booleanAnnotationIndex) |
void |
setBooleanAnnotationValue(java.lang.Boolean value,
int booleanAnnotationIndex) |
void |
setChannelAcquisitionMode(ome.xml.model.enums.AcquisitionMode acquisitionMode,
int imageIndex,
int channelIndex) |
void |
setChannelAnnotationRef(java.lang.String annotation,
int imageIndex,
int channelIndex,
int annotationRefIndex) |
void |
setChannelColor(ome.xml.model.primitives.Color color,
int imageIndex,
int channelIndex) |
void |
setChannelContrastMethod(ome.xml.model.enums.ContrastMethod contrastMethod,
int imageIndex,
int channelIndex) |
void |
setChannelEmissionWavelength(ome.xml.model.primitives.PositiveInteger emissionWavelength,
int imageIndex,
int channelIndex) |
void |
setChannelExcitationWavelength(ome.xml.model.primitives.PositiveInteger excitationWavelength,
int imageIndex,
int channelIndex)
(non-Javadoc)
|
void |
setChannelFilterSetRef(java.lang.String filterSet,
int imageIndex,
int channelIndex) |
void |
setChannelFluor(java.lang.String fluor,
int imageIndex,
int channelIndex) |
void |
setChannelGlobalMinMax(int channel,
double minimum,
double maximum,
int series) |
void |
setChannelID(java.lang.String id,
int imageIndex,
int channelIndex) |
void |
setChannelIlluminationType(ome.xml.model.enums.IlluminationType illuminationType,
int imageIndex,
int channelIndex) |
void |
setChannelLightSourceSettingsAttenuation(ome.xml.model.primitives.PercentFraction attenuation,
int imageIndex,
int channelIndex) |
void |
setChannelLightSourceSettingsID(java.lang.String id,
int imageIndex,
int channelIndex) |
void |
setChannelLightSourceSettingsWavelength(ome.xml.model.primitives.PositiveInteger wavelength,
int imageIndex,
int channelIndex) |
void |
setChannelName(java.lang.String name,
int imageIndex,
int channelIndex) |
void |
setChannelNDFilter(java.lang.Double ndfilter,
int imageIndex,
int channelIndex) |
void |
setChannelPinholeSize(java.lang.Double pinholeSize,
int imageIndex,
int channelIndex) |
void |
setChannelPockelCellSetting(java.lang.Integer pockelCellSetting,
int imageIndex,
int channelIndex) |
void |
setChannelSamplesPerPixel(ome.xml.model.primitives.PositiveInteger samplesPerPixel,
int imageIndex,
int channelIndex) |
void |
setCommentAnnotationAnnotationRef(java.lang.String annotation,
int commentAnnotationIndex,
int annotationRefIndex) |
void |
setCommentAnnotationAnnotator(java.lang.String value,
int index) |
void |
setCommentAnnotationDescription(java.lang.String description,
int commentAnnotationIndex) |
void |
setCommentAnnotationID(java.lang.String id,
int commentAnnotationIndex) |
void |
setCommentAnnotationNamespace(java.lang.String namespace,
int commentAnnotationIndex) |
void |
setCommentAnnotationValue(java.lang.String value,
int commentAnnotationIndex) |
void |
setCurrentGroup(long groupID)
Changes the default group of the currently logged in user.
|
void |
setCurrentLogFile(java.lang.String logFilename,
java.lang.String token) |
void |
setDatasetAnnotationRef(java.lang.String annotation,
int datasetIndex,
int annotationRefIndex) |
void |
setDatasetDescription(java.lang.String description,
int datasetIndex) |
void |
setDatasetExperimenterGroupRef(java.lang.String group,
int datasetIndex) |
void |
setDatasetExperimenterRef(java.lang.String experimenter,
int datasetIndex) |
void |
setDatasetID(java.lang.String id,
int datasetIndex) |
void |
setDatasetImageRef(java.lang.String image,
int datasetIndex,
int imageRefIndex) |
void |
setDatasetName(java.lang.String name,
int datasetIndex) |
void |
setDetectorAmplificationGain(java.lang.Double amplificationGain,
int instrumentIndex,
int detectorIndex) |
void |
setDetectorGain(java.lang.Double gain,
int instrumentIndex,
int detectorIndex) |
void |
setDetectorID(java.lang.String id,
int instrumentIndex,
int detectorIndex) |
void |
setDetectorLotNumber(java.lang.String lotNumber,
int instrumentIndex,
int detectorIndex) |
void |
setDetectorManufacturer(java.lang.String manufacturer,
int instrumentIndex,
int detectorIndex) |
void |
setDetectorModel(java.lang.String model,
int instrumentIndex,
int detectorIndex) |
void |
setDetectorOffset(java.lang.Double offset,
int instrumentIndex,
int detectorIndex) |
void |
setDetectorSerialNumber(java.lang.String serialNumber,
int instrumentIndex,
int detectorIndex) |
void |
setDetectorSettingsBinning(ome.xml.model.enums.Binning binning,
int imageIndex,
int channelIndex) |
void |
setDetectorSettingsGain(java.lang.Double gain,
int imageIndex,
int channelIndex) |
void |
setDetectorSettingsID(java.lang.String id,
int imageIndex,
int channelIndex) |
void |
setDetectorSettingsIntegration(ome.xml.model.primitives.PositiveInteger integration,
int imageIndex,
int channelIndex) |
void |
setDetectorSettingsOffset(java.lang.Double offset,
int imageIndex,
int channelIndex) |
void |
setDetectorSettingsReadOutRate(java.lang.Double readOutRate,
int imageIndex,
int channelIndex) |
void |
setDetectorSettingsVoltage(java.lang.Double voltage,
int imageIndex,
int channelIndex) |
void |
setDetectorSettingsZoom(java.lang.Double zoom,
int imageIndex,
int channelIndex) |
void |
setDetectorType(ome.xml.model.enums.DetectorType type,
int instrumentIndex,
int detectorIndex) |
void |
setDetectorVoltage(java.lang.Double voltage,
int instrumentIndex,
int detectorIndex) |
void |
setDetectorZoom(java.lang.Double zoom,
int instrumentIndex,
int detectorIndex) |
void |
setDichroicID(java.lang.String id,
int instrumentIndex,
int dichroicIndex) |
void |
setDichroicLotNumber(java.lang.String lotNumber,
int instrumentIndex,
int dichroicIndex) |
void |
setDichroicManufacturer(java.lang.String manufacturer,
int instrumentIndex,
int dichroicIndex) |
void |
setDichroicModel(java.lang.String model,
int instrumentIndex,
int dichroicIndex) |
void |
setDichroicSerialNumber(java.lang.String serialNumber,
int instrumentIndex,
int dichroicIndex) |
void |
setDoubleAnnotationAnnotationRef(java.lang.String annotation,
int doubleAnnotationIndex,
int annotationRefIndex) |
void |
setDoubleAnnotationAnnotator(java.lang.String value,
int index) |
void |
setDoubleAnnotationDescription(java.lang.String description,
int doubleAnnotationIndex) |
void |
setDoubleAnnotationID(java.lang.String id,
int doubleAnnotationIndex) |
void |
setDoubleAnnotationNamespace(java.lang.String namespace,
int doubleAnnotationIndex) |
void |
setDoubleAnnotationValue(java.lang.Double value,
int doubleAnnotationIndex) |
void |
setEllipseDescription(java.lang.String description,
int ROIIndex,
int shapeIndex) |
void |
setEllipseFillColor(ome.xml.model.primitives.Color fill,
int ROIIndex,
int shapeIndex) |
void |
setEllipseFillRule(ome.xml.model.enums.FillRule fillRule,
int ROIIndex,
int shapeIndex) |
void |
setEllipseFontFamily(ome.xml.model.enums.FontFamily fontFamily,
int ROIIndex,
int shapeIndex) |
void |
setEllipseFontSize(ome.xml.model.primitives.NonNegativeInteger fontSize,
int ROIIndex,
int shapeIndex) |
void |
setEllipseFontStyle(ome.xml.model.enums.FontStyle fontStyle,
int ROIIndex,
int shapeIndex) |
void |
setEllipseID(java.lang.String id,
int ROIIndex,
int shapeIndex) |
void |
setEllipseLineCap(ome.xml.model.enums.LineCap lineCap,
int ROIIndex,
int shapeIndex) |
void |
setEllipseLocked(java.lang.Boolean locked,
int ROIIndex,
int shapeIndex) |
void |
setEllipseRadiusX(java.lang.Double radiusX,
int ROIIndex,
int shapeIndex) |
void |
setEllipseRadiusY(java.lang.Double radiusY,
int ROIIndex,
int shapeIndex) |
void |
setEllipseStrokeColor(ome.xml.model.primitives.Color stroke,
int ROIIndex,
int shapeIndex) |
void |
setEllipseStrokeDashArray(java.lang.String strokeDashArray,
int ROIIndex,
int shapeIndex) |
void |
setEllipseStrokeWidth(java.lang.Double strokeWidth,
int ROIIndex,
int shapeIndex) |
void |
setEllipseText(java.lang.String text,
int ROIIndex,
int shapeIndex) |
void |
setEllipseTheC(ome.xml.model.primitives.NonNegativeInteger theC,
int ROIIndex,
int shapeIndex) |
void |
setEllipseTheT(ome.xml.model.primitives.NonNegativeInteger theT,
int ROIIndex,
int shapeIndex) |
void |
setEllipseTheZ(ome.xml.model.primitives.NonNegativeInteger theZ,
int ROIIndex,
int shapeIndex) |
void |
setEllipseTransform(ome.xml.model.AffineTransform transform,
int ROIIndex,
int shapeIndex) |
void |
setEllipseVisible(java.lang.Boolean visible,
int ROIIndex,
int shapeIndex) |
void |
setEllipseX(java.lang.Double x,
int ROIIndex,
int shapeIndex) |
void |
setEllipseY(java.lang.Double y,
int ROIIndex,
int shapeIndex) |
void |
setEncryptedConnection(boolean encryptedConnection) |
void |
setEnumerationProvider(EnumerationProvider enumProvider)
Sets the active enumeration provider.
|
void |
setExperimentDescription(java.lang.String description,
int experimentIndex) |
void |
setExperimenterAnnotationRef(java.lang.String annotation,
int experimenterIndex,
int annotationRefIndex) |
void |
setExperimenterDisplayName(java.lang.String displayName,
int experimenterIndex) |
void |
setExperimenterEmail(java.lang.String email,
int experimenterIndex) |
void |
setExperimenterFirstName(java.lang.String firstName,
int experimenterIndex) |
void |
setExperimenterGroupAnnotationRef(java.lang.String annotation,
int experimenterGroupIndex,
int annotationRefIndex) |
void |
setExperimenterGroupDescription(java.lang.String description,
int groupIndex) |
void |
setExperimenterGroupExperimenterRef(java.lang.String experimenter,
int experimenterGroupIndex,
int experimenterRefIndex) |
void |
setExperimenterGroupID(java.lang.String id,
int groupIndex) |
void |
setExperimenterGroupLeader(java.lang.String leader,
int groupIndex,
int leaderIndex) |
void |
setExperimenterGroupName(java.lang.String name,
int groupIndex) |
void |
setExperimenterGroupRef(java.lang.String group,
int experimenterIndex,
int groupRefIndex) |
void |
setExperimenterID(java.lang.String id,
int experimenterIndex) |
void |
setExperimenterInstitution(java.lang.String institution,
int experimenterIndex) |
void |
setExperimenterLastName(java.lang.String lastName,
int experimenterIndex) |
void |
setExperimenterMiddleName(java.lang.String middleName,
int experimenterIndex) |
void |
setExperimenterUserName(java.lang.String userName,
int experimenterIndex) |
void |
setExperimentExperimenterRef(java.lang.String experimenter,
int experimentIndex) |
void |
setExperimentID(java.lang.String id,
int experimentIndex) |
void |
setExperimentType(ome.xml.model.enums.ExperimentType type,
int experimentIndex) |
void |
setFilamentID(java.lang.String id,
int instrumentIndex,
int lightSourceIndex) |
void |
setFilamentLotNumber(java.lang.String lotNumber,
int instrumentIndex,
int lightSourceIndex) |
void |
setFilamentManufacturer(java.lang.String manufacturer,
int instrumentIndex,
int lightSourceIndex) |
void |
setFilamentModel(java.lang.String model,
int instrumentIndex,
int lightSourceIndex) |
void |
setFilamentPower(java.lang.Double power,
int instrumentIndex,
int lightSourceIndex) |
void |
setFilamentSerialNumber(java.lang.String serialNumber,
int instrumentIndex,
int lightSourceIndex) |
void |
setFilamentType(ome.xml.model.enums.FilamentType type,
int instrumentIndex,
int lightSourceIndex) |
void |
setFileAnnotationAnnotationRef(java.lang.String annotation,
int fileAnnotationIndex,
int annotationRefIndex) |
void |
setFileAnnotationAnnotator(java.lang.String value,
int index) |
void |
setFileAnnotationBinaryFileFileName(java.lang.String fileName,
int fileAnnotationIndex) |
void |
setFileAnnotationBinaryFileMIMEType(java.lang.String mimetype,
int fileAnnotationIndex) |
void |
setFileAnnotationBinaryFileSize(ome.xml.model.primitives.NonNegativeLong size,
int fileAnnotationIndex) |
void |
setFileAnnotationDescription(java.lang.String description,
int fileAnnotationIndex) |
void |
setFileAnnotationID(java.lang.String id,
int fileAnnotationIndex) |
void |
setFileAnnotationNamespace(java.lang.String namespace,
int fileAnnotationIndex) |
void |
setFilterFilterWheel(java.lang.String filterWheel,
int instrumentIndex,
int filterIndex) |
void |
setFilterID(java.lang.String id,
int instrumentIndex,
int filterIndex) |
void |
setFilterLotNumber(java.lang.String lotNumber,
int instrumentIndex,
int filterIndex) |
void |
setFilterManufacturer(java.lang.String manufacturer,
int instrumentIndex,
int filterIndex) |
void |
setFilterModel(java.lang.String model,
int instrumentIndex,
int filterIndex) |
void |
setFilterSerialNumber(java.lang.String serialNumber,
int instrumentIndex,
int filterIndex) |
void |
setFilterSetDichroicRef(java.lang.String dichroic,
int instrumentIndex,
int filterSetIndex) |
void |
setFilterSetEmissionFilterRef(java.lang.String emissionFilter,
int instrumentIndex,
int filterSetIndex,
int emissionFilterRefIndex) |
void |
setFilterSetExcitationFilterRef(java.lang.String excitationFilter,
int instrumentIndex,
int filterSetIndex,
int excitationFilterRefIndex) |
void |
setFilterSetID(java.lang.String id,
int instrumentIndex,
int filterSetIndex) |
void |
setFilterSetLotNumber(java.lang.String lotNumber,
int instrumentIndex,
int filterSetIndex) |
void |
setFilterSetManufacturer(java.lang.String manufacturer,
int instrumentIndex,
int filterSetIndex) |
void |
setFilterSetModel(java.lang.String model,
int instrumentIndex,
int filterSetIndex) |
void |
setFilterSetSerialNumber(java.lang.String serialNumber,
int instrumentIndex,
int filterSetIndex) |
void |
setFilterType(ome.xml.model.enums.FilterType type,
int instrumentIndex,
int filterIndex) |
java.lang.Long |
setGroup(java.lang.Long groupID)
Sets the id which will be used by
initializeServices(boolean)
to set the call context for all services. |
void |
setImageAcquisitionDate(ome.xml.model.primitives.Timestamp acquiredDate,
int imageIndex) |
void |
setImageAnnotationRef(java.lang.String annotation,
int imageIndex,
int annotationRefIndex) |
void |
setImageDescription(java.lang.String description,
int imageIndex) |
void |
setImageExperimenterGroupRef(java.lang.String group,
int imageIndex) |
void |
setImageExperimenterRef(java.lang.String experimenter,
int imageIndex) |
void |
setImageExperimentRef(java.lang.String experiment,
int imageIndex) |
void |
setImageID(java.lang.String id,
int imageIndex) |
void |
setImageInstrumentRef(java.lang.String instrument,
int imageIndex) |
void |
setImageMicrobeamManipulationRef(java.lang.String microbeamManipulation,
int imageIndex,
int microbeamManipulationRefIndex) |
void |
setImageName(java.lang.String name,
int imageIndex) |
void |
setImageROIRef(java.lang.String roi,
int imageIndex,
int ROIRefIndex) |
void |
setImagingEnvironmentAirPressure(java.lang.Double airPressure,
int imageIndex) |
void |
setImagingEnvironmentCO2Percent(ome.xml.model.primitives.PercentFraction co2percent,
int imageIndex) |
void |
setImagingEnvironmentHumidity(ome.xml.model.primitives.PercentFraction humidity,
int imageIndex) |
void |
setImagingEnvironmentTemperature(java.lang.Double temperature,
int imageIndex) |
void |
setInstanceProvider(InstanceProvider instanceProvider)
Sets the active instance provider.
|
void |
setInstrumentID(java.lang.String id,
int instrumentIndex) |
void |
setLabelFillColor(ome.xml.model.primitives.Color fill,
int ROIIndex,
int shapeIndex) |
void |
setLabelFillRule(ome.xml.model.enums.FillRule fillRule,
int ROIIndex,
int shapeIndex) |
void |
setLabelFontFamily(ome.xml.model.enums.FontFamily fontFamily,
int ROIIndex,
int shapeIndex) |
void |
setLabelFontSize(ome.xml.model.primitives.NonNegativeInteger fontSize,
int ROIIndex,
int shapeIndex) |
void |
setLabelFontStyle(ome.xml.model.enums.FontStyle fontStyle,
int ROIIndex,
int shapeIndex) |
void |
setLabelID(java.lang.String id,
int ROIIndex,
int shapeIndex) |
void |
setLabelLineCap(ome.xml.model.enums.LineCap lineCap,
int ROIIndex,
int shapeIndex) |
void |
setLabelLocked(java.lang.Boolean locked,
int ROIIndex,
int shapeIndex) |
void |
setLabelStrokeColor(ome.xml.model.primitives.Color stroke,
int ROIIndex,
int shapeIndex) |
void |
setLabelStrokeDashArray(java.lang.String strokeDashArray,
int ROIIndex,
int shapeIndex) |
void |
setLabelStrokeWidth(java.lang.Double strokeWidth,
int ROIIndex,
int shapeIndex) |
void |
setLabelText(java.lang.String text,
int ROIIndex,
int shapeIndex) |
void |
setLabelTheC(ome.xml.model.primitives.NonNegativeInteger theC,
int ROIIndex,
int shapeIndex) |
void |
setLabelTheT(ome.xml.model.primitives.NonNegativeInteger theT,
int ROIIndex,
int shapeIndex) |
void |
setLabelTheZ(ome.xml.model.primitives.NonNegativeInteger theZ,
int ROIIndex,
int shapeIndex) |
void |
setLabelTransform(ome.xml.model.AffineTransform transform,
int ROIIndex,
int shapeIndex) |
void |
setLabelVisible(java.lang.Boolean visible,
int ROIIndex,
int shapeIndex) |
void |
setLabelX(java.lang.Double x,
int ROIIndex,
int shapeIndex) |
void |
setLabelY(java.lang.Double y,
int ROIIndex,
int shapeIndex) |
void |
setLaserFrequencyMultiplication(ome.xml.model.primitives.PositiveInteger frequencyMultiplication,
int instrumentIndex,
int lightSourceIndex) |
void |
setLaserID(java.lang.String id,
int instrumentIndex,
int lightSourceIndex) |
void |
setLaserLaserMedium(ome.xml.model.enums.LaserMedium laserMedium,
int instrumentIndex,
int lightSourceIndex) |
void |
setLaserLotNumber(java.lang.String lotNumber,
int instrumentIndex,
int lightSourceIndex) |
void |
setLaserManufacturer(java.lang.String manufacturer,
int instrumentIndex,
int lightSourceIndex) |
void |
setLaserModel(java.lang.String model,
int instrumentIndex,
int lightSourceIndex) |
void |
setLaserPockelCell(java.lang.Boolean pockelCell,
int instrumentIndex,
int lightSourceIndex) |
void |
setLaserPower(java.lang.Double power,
int instrumentIndex,
int lightSourceIndex) |
void |
setLaserPulse(ome.xml.model.enums.Pulse pulse,
int instrumentIndex,
int lightSourceIndex) |
void |
setLaserPump(java.lang.String pump,
int instrumentIndex,
int lightSourceIndex) |
void |
setLaserRepetitionRate(java.lang.Double repetitionRate,
int instrumentIndex,
int lightSourceIndex) |
void |
setLaserSerialNumber(java.lang.String serialNumber,
int instrumentIndex,
int lightSourceIndex) |
void |
setLaserTuneable(java.lang.Boolean tuneable,
int instrumentIndex,
int lightSourceIndex) |
void |
setLaserType(ome.xml.model.enums.LaserType type,
int instrumentIndex,
int lightSourceIndex) |
void |
setLaserWavelength(ome.xml.model.primitives.PositiveInteger wavelength,
int instrumentIndex,
int lightSourceIndex) |
void |
setLightEmittingDiodeID(java.lang.String id,
int instrumentIndex,
int lightSourceIndex) |
void |
setLightEmittingDiodeLotNumber(java.lang.String lotNumber,
int instrumentIndex,
int lightSourceIndex) |
void |
setLightEmittingDiodeManufacturer(java.lang.String manufacturer,
int instrumentIndex,
int lightSourceIndex) |
void |
setLightEmittingDiodeModel(java.lang.String model,
int instrumentIndex,
int lightSourceIndex) |
void |
setLightEmittingDiodePower(java.lang.Double power,
int instrumentIndex,
int lightSourceIndex) |
void |
setLightEmittingDiodeSerialNumber(java.lang.String serialNumber,
int instrumentIndex,
int lightSourceIndex) |
void |
setLightPathDichroicRef(java.lang.String dichroic,
int imageIndex,
int channelIndex) |
void |
setLightPathEmissionFilterRef(java.lang.String emissionFilter,
int imageIndex,
int channelIndex,
int emissionFilterRefIndex) |
void |
setLightPathExcitationFilterRef(java.lang.String excitationFilter,
int imageIndex,
int channelIndex,
int excitationFilterRefIndex) |
void |
setLineFillColor(ome.xml.model.primitives.Color fill,
int ROIIndex,
int shapeIndex) |
void |
setLineFillRule(ome.xml.model.enums.FillRule fillRule,
int ROIIndex,
int shapeIndex) |
void |
setLineFontFamily(ome.xml.model.enums.FontFamily fontFamily,
int ROIIndex,
int shapeIndex) |
void |
setLineFontSize(ome.xml.model.primitives.NonNegativeInteger fontSize,
int ROIIndex,
int shapeIndex) |
void |
setLineFontStyle(ome.xml.model.enums.FontStyle fontStyle,
int ROIIndex,
int shapeIndex) |
void |
setLineID(java.lang.String id,
int ROIIndex,
int shapeIndex) |
void |
setLineLineCap(ome.xml.model.enums.LineCap lineCap,
int ROIIndex,
int shapeIndex) |
void |
setLineLocked(java.lang.Boolean locked,
int ROIIndex,
int shapeIndex) |
void |
setLineMarkerEnd(ome.xml.model.enums.Marker markerEnd,
int ROIIndex,
int shapeIndex) |
void |
setLineMarkerStart(ome.xml.model.enums.Marker markerStart,
int ROIIndex,
int shapeIndex) |
void |
setLineStrokeColor(ome.xml.model.primitives.Color stroke,
int ROIIndex,
int shapeIndex) |
void |
setLineStrokeDashArray(java.lang.String strokeDashArray,
int ROIIndex,
int shapeIndex) |
void |
setLineStrokeWidth(java.lang.Double strokeWidth,
int ROIIndex,
int shapeIndex) |
void |
setLineText(java.lang.String text,
int ROIIndex,
int shapeIndex) |
void |
setLineTheC(ome.xml.model.primitives.NonNegativeInteger theC,
int ROIIndex,
int shapeIndex) |
void |
setLineTheT(ome.xml.model.primitives.NonNegativeInteger theT,
int ROIIndex,
int shapeIndex) |
void |
setLineTheZ(ome.xml.model.primitives.NonNegativeInteger theZ,
int ROIIndex,
int shapeIndex) |
void |
setLineTransform(ome.xml.model.AffineTransform transform,
int ROIIndex,
int shapeIndex) |
void |
setLineVisible(java.lang.Boolean visible,
int ROIIndex,
int shapeIndex) |
void |
setLineX1(java.lang.Double x1,
int ROIIndex,
int shapeIndex) |
void |
setLineX2(java.lang.Double x2,
int ROIIndex,
int shapeIndex) |
void |
setLineY1(java.lang.Double y1,
int ROIIndex,
int shapeIndex) |
void |
setLineY2(java.lang.Double y2,
int ROIIndex,
int shapeIndex) |
void |
setListAnnotationAnnotationRef(java.lang.String annotation,
int listAnnotationIndex,
int annotationRefIndex) |
void |
setListAnnotationAnnotator(java.lang.String value,
int index) |
void |
setListAnnotationDescription(java.lang.String description,
int listAnnotationIndex) |
void |
setListAnnotationID(java.lang.String id,
int listAnnotationIndex) |
void |
setListAnnotationNamespace(java.lang.String namespace,
int listAnnotationIndex) |
void |
setLongAnnotationAnnotationRef(java.lang.String annotation,
int longAnnotationIndex,
int annotationRefIndex) |
void |
setLongAnnotationAnnotator(java.lang.String value,
int XMLAnnotationIndex) |
void |
setLongAnnotationDescription(java.lang.String description,
int longAnnotationIndex) |
void |
setLongAnnotationID(java.lang.String id,
int longAnnotationIndex) |
void |
setLongAnnotationNamespace(java.lang.String namespace,
int longAnnotationIndex) |
void |
setLongAnnotationValue(java.lang.Long value,
int longAnnotationIndex) |
void |
setMaskBinData(byte[] binData,
int roiIndex,
int shapeIndex) |
void |
setMaskFillColor(ome.xml.model.primitives.Color fill,
int ROIIndex,
int shapeIndex) |
void |
setMaskFillRule(ome.xml.model.enums.FillRule fillRule,
int ROIIndex,
int shapeIndex) |
void |
setMaskFontFamily(ome.xml.model.enums.FontFamily fontFamily,
int ROIIndex,
int shapeIndex) |
void |
setMaskFontSize(ome.xml.model.primitives.NonNegativeInteger fontSize,
int ROIIndex,
int shapeIndex) |
void |
setMaskFontStyle(ome.xml.model.enums.FontStyle fontStyle,
int ROIIndex,
int shapeIndex) |
void |
setMaskHeight(java.lang.Double height,
int ROIIndex,
int shapeIndex) |
void |
setMaskID(java.lang.String id,
int ROIIndex,
int shapeIndex) |
void |
setMaskLineCap(ome.xml.model.enums.LineCap lineCap,
int ROIIndex,
int shapeIndex) |
void |
setMaskLocked(java.lang.Boolean locked,
int ROIIndex,
int shapeIndex) |
void |
setMaskStrokeColor(ome.xml.model.primitives.Color stroke,
int ROIIndex,
int shapeIndex) |
void |
setMaskStrokeDashArray(java.lang.String strokeDashArray,
int ROIIndex,
int shapeIndex) |
void |
setMaskStrokeWidth(java.lang.Double strokeWidth,
int ROIIndex,
int shapeIndex) |
void |
setMaskText(java.lang.String description,
int ROIIndex,
int shapeIndex) |
void |
setMaskTheC(ome.xml.model.primitives.NonNegativeInteger theC,
int ROIIndex,
int shapeIndex) |
void |
setMaskTheT(ome.xml.model.primitives.NonNegativeInteger theT,
int ROIIndex,
int shapeIndex) |
void |
setMaskTheZ(ome.xml.model.primitives.NonNegativeInteger theZ,
int ROIIndex,
int shapeIndex) |
void |
setMaskTransform(ome.xml.model.AffineTransform transform,
int ROIIndex,
int shapeIndex) |
void |
setMaskVisible(java.lang.Boolean visible,
int ROIIndex,
int shapeIndex) |
void |
setMaskWidth(java.lang.Double width,
int ROIIndex,
int shapeIndex) |
void |
setMaskX(java.lang.Double x,
int ROIIndex,
int shapeIndex) |
void |
setMaskY(java.lang.Double y,
int ROIIndex,
int shapeIndex) |
void |
setMicrobeamManipulationDescription(java.lang.String description,
int experimentIndex,
int microbeamManipulationIndex) |
void |
setMicrobeamManipulationExperimenterRef(java.lang.String experimenter,
int experimentIndex,
int microbeamManipulationIndex) |
void |
setMicrobeamManipulationID(java.lang.String id,
int experimentIndex,
int microbeamManipulationIndex) |
void |
setMicrobeamManipulationLightSourceSettingsAttenuation(ome.xml.model.primitives.PercentFraction attenuation,
int experimentIndex,
int microbeamManipulationIndex,
int lightSourceSettingsIndex) |
void |
setMicrobeamManipulationLightSourceSettingsID(java.lang.String id,
int experimentIndex,
int microbeamManipulationIndex,
int lightSourceSettingsIndex) |
void |
setMicrobeamManipulationLightSourceSettingsWavelength(ome.xml.model.primitives.PositiveInteger wavelength,
int experimentIndex,
int microbeamManipulationIndex,
int lightSourceSettingsIndex) |
void |
setMicrobeamManipulationROIRef(java.lang.String roi,
int experimentIndex,
int microbeamManipulationIndex,
int ROIRefIndex) |
void |
setMicrobeamManipulationType(ome.xml.model.enums.MicrobeamManipulationType type,
int experimentIndex,
int microbeamManipulationIndex) |
void |
setMicroscopeLotNumber(java.lang.String lotNumber,
int instrumentIndex) |
void |
setMicroscopeManufacturer(java.lang.String manufacturer,
int instrumentIndex) |
void |
setMicroscopeModel(java.lang.String model,
int instrumentIndex) |
void |
setMicroscopeSerialNumber(java.lang.String serialNumber,
int instrumentIndex) |
void |
setMicroscopeType(ome.xml.model.enums.MicroscopeType type,
int instrumentIndex) |
void |
setModelProcessors(java.util.List<ModelProcessor> modelProcessors)
Sets the current set of model processors.
|
void |
setObjectiveCalibratedMagnification(java.lang.Double calibratedMagnification,
int instrumentIndex,
int objectiveIndex) |
void |
setObjectiveCorrection(ome.xml.model.enums.Correction correction,
int instrumentIndex,
int objectiveIndex) |
void |
setObjectiveID(java.lang.String id,
int instrumentIndex,
int objectiveIndex) |
void |
setObjectiveImmersion(ome.xml.model.enums.Immersion immersion,
int instrumentIndex,
int objectiveIndex) |
void |
setObjectiveIris(java.lang.Boolean iris,
int instrumentIndex,
int objectiveIndex) |
void |
setObjectiveLensNA(java.lang.Double lensNA,
int instrumentIndex,
int objectiveIndex) |
void |
setObjectiveLotNumber(java.lang.String lotNumber,
int instrumentIndex,
int objectiveIndex) |
void |
setObjectiveManufacturer(java.lang.String manufacturer,
int instrumentIndex,
int objectiveIndex) |
void |
setObjectiveModel(java.lang.String model,
int instrumentIndex,
int objectiveIndex) |
void |
setObjectiveNominalMagnification(java.lang.Double nominalMagnification,
int instrumentIndex,
int objectiveIndex) |
void |
setObjectiveSerialNumber(java.lang.String serialNumber,
int instrumentIndex,
int objectiveIndex) |
void |
setObjectiveSettingsCorrectionCollar(java.lang.Double correctionCollar,
int imageIndex) |
void |
setObjectiveSettingsID(java.lang.String id,
int imageIndex) |
void |
setObjectiveSettingsMedium(ome.xml.model.enums.Medium medium,
int imageIndex) |
void |
setObjectiveSettingsRefractiveIndex(java.lang.Double refractiveIndex,
int imageIndex) |
void |
setObjectiveWorkingDistance(java.lang.Double workingDistance,
int instrumentIndex,
int objectiveIndex) |
void |
setPixelsAnnotationRef(java.lang.String annotation,
int imageIndex,
int annotationRefIndex) |
void |
setPixelsBigEndian(java.lang.Boolean value,
int index) |
void |
setPixelsBinDataBigEndian(java.lang.Boolean bigEndian,
int imageIndex,
int binDataIndex) |
void |
setPixelsDimensionOrder(ome.xml.model.enums.DimensionOrder dimensionOrder,
int imageIndex) |
void |
setPixelsID(java.lang.String id,
int imageIndex) |
void |
setPixelsInterleaved(java.lang.Boolean value,
int index) |
void |
setPixelsParams(long pixelsId,
int series,
java.lang.String targetName)
Sets extended the properties on a pixel set.
|
void |
setPixelsParams(long pixelsId,
int series,
java.lang.String targetName,
java.lang.String repoUuid)
Sets extended the properties on a pixel set including the repository
which the object is to be found in.
|
void |
setPixelsPhysicalSizeX(ome.xml.model.primitives.PositiveFloat physicalSizeX,
int imageIndex) |
void |
setPixelsPhysicalSizeY(ome.xml.model.primitives.PositiveFloat physicalSizeY,
int imageIndex) |
void |
setPixelsPhysicalSizeZ(ome.xml.model.primitives.PositiveFloat physicalSizeZ,
int imageIndex) |
void |
setPixelsSignificantBits(ome.xml.model.primitives.PositiveInteger value,
int imageIndex) |
void |
setPixelsSizeC(ome.xml.model.primitives.PositiveInteger sizeC,
int imageIndex) |
void |
setPixelsSizeT(ome.xml.model.primitives.PositiveInteger sizeT,
int imageIndex) |
void |
setPixelsSizeX(ome.xml.model.primitives.PositiveInteger sizeX,
int imageIndex) |
void |
setPixelsSizeY(ome.xml.model.primitives.PositiveInteger sizeY,
int imageIndex) |
void |
setPixelsSizeZ(ome.xml.model.primitives.PositiveInteger sizeZ,
int imageIndex) |
void |
setPixelsTimeIncrement(java.lang.Double timeIncrement,
int imageIndex) |
void |
setPixelsType(ome.xml.model.enums.PixelType type,
int imageIndex) |
void |
setPlane(java.lang.Long pixId,
byte[] arrayBuf,
int z,
int c,
int t)
Writes a plane to the server.
|
void |
setPlaneAnnotationRef(java.lang.String annotation,
int imageIndex,
int planeIndex,
int annotationRefIndex) |
void |
setPlaneDeltaT(java.lang.Double deltaT,
int imageIndex,
int planeIndex) |
void |
setPlaneExposureTime(java.lang.Double exposureTime,
int imageIndex,
int planeIndex) |
void |
setPlaneHashSHA1(java.lang.String hashSHA1,
int imageIndex,
int planeIndex) |
void |
setPlanePositionX(java.lang.Double positionX,
int imageIndex,
int planeIndex) |
void |
setPlanePositionY(java.lang.Double positionY,
int imageIndex,
int planeIndex) |
void |
setPlanePositionZ(java.lang.Double positionZ,
int imageIndex,
int planeIndex) |
void |
setPlaneTheC(ome.xml.model.primitives.NonNegativeInteger theC,
int imageIndex,
int planeIndex) |
void |
setPlaneTheT(ome.xml.model.primitives.NonNegativeInteger theT,
int imageIndex,
int planeIndex) |
void |
setPlaneTheZ(ome.xml.model.primitives.NonNegativeInteger theZ,
int imageIndex,
int planeIndex) |
void |
setPlateAcquisitionAnnotationRef(java.lang.String annotation,
int plateIndex,
int plateAcquisitionIndex,
int annotationRefIndex) |
void |
setPlateAcquisitionDescription(java.lang.String description,
int plateIndex,
int plateAcquisitionIndex) |
void |
setPlateAcquisitionEndTime(ome.xml.model.primitives.Timestamp endTime,
int plateIndex,
int plateAcquisitionIndex) |
void |
setPlateAcquisitionID(java.lang.String id,
int plateIndex,
int plateAcquisitionIndex) |
void |
setPlateAcquisitionMaximumFieldCount(ome.xml.model.primitives.PositiveInteger maximumFieldCount,
int plateIndex,
int plateAcquisitionIndex) |
void |
setPlateAcquisitionName(java.lang.String name,
int plateIndex,
int plateAcquisitionIndex) |
void |
setPlateAcquisitionStartTime(ome.xml.model.primitives.Timestamp startTime,
int plateIndex,
int plateAcquisitionIndex) |
void |
setPlateAcquisitionWellSampleRef(java.lang.String wellSample,
int plateIndex,
int plateAcquisitionIndex,
int wellSampleRefIndex) |
void |
setPlateAnnotationRef(java.lang.String annotation,
int plateIndex,
int annotationRefIndex) |
void |
setPlateColumnNamingConvention(ome.xml.model.enums.NamingConvention columnNamingConvention,
int plateIndex) |
void |
setPlateColumns(ome.xml.model.primitives.PositiveInteger columns,
int plateIndex) |
void |
setPlateDescription(java.lang.String description,
int plateIndex) |
void |
setPlateExternalIdentifier(java.lang.String externalIdentifier,
int plateIndex) |
void |
setPlateFieldIndex(ome.xml.model.primitives.NonNegativeInteger fieldIndex,
int plateIndex) |
void |
setPlateID(java.lang.String id,
int plateIndex) |
void |
setPlateName(java.lang.String name,
int plateIndex) |
void |
setPlateRowNamingConvention(ome.xml.model.enums.NamingConvention rowNamingConvention,
int plateIndex) |
void |
setPlateRows(ome.xml.model.primitives.PositiveInteger rows,
int plateIndex) |
void |
setPlateScreenRef(java.lang.String screen,
int plateIndex,
int screenRefIndex) |
void |
setPlateStatus(java.lang.String status,
int plateIndex) |
void |
setPlateWellOriginX(java.lang.Double wellOriginX,
int plateIndex) |
void |
setPlateWellOriginY(java.lang.Double wellOriginY,
int plateIndex) |
void |
setPointFillColor(ome.xml.model.primitives.Color fill,
int ROIIndex,
int shapeIndex) |
void |
setPointFillRule(ome.xml.model.enums.FillRule fillRule,
int ROIIndex,
int shapeIndex) |
void |
setPointFontFamily(ome.xml.model.enums.FontFamily fontFamily,
int ROIIndex,
int shapeIndex) |
void |
setPointFontSize(ome.xml.model.primitives.NonNegativeInteger fontSize,
int ROIIndex,
int shapeIndex) |
void |
setPointFontStyle(ome.xml.model.enums.FontStyle fontStyle,
int ROIIndex,
int shapeIndex) |
void |
setPointID(java.lang.String id,
int ROIIndex,
int shapeIndex) |
void |
setPointLineCap(ome.xml.model.enums.LineCap lineCap,
int ROIIndex,
int shapeIndex) |
void |
setPointLocked(java.lang.Boolean locked,
int ROIIndex,
int shapeIndex) |
void |
setPointStrokeColor(ome.xml.model.primitives.Color stroke,
int ROIIndex,
int shapeIndex) |
void |
setPointStrokeDashArray(java.lang.String strokeDashArray,
int ROIIndex,
int shapeIndex) |
void |
setPointStrokeWidth(java.lang.Double strokeWidth,
int ROIIndex,
int shapeIndex) |
void |
setPointText(java.lang.String text,
int ROIIndex,
int shapeIndex) |
void |
setPointTheC(ome.xml.model.primitives.NonNegativeInteger theC,
int ROIIndex,
int shapeIndex) |
void |
setPointTheT(ome.xml.model.primitives.NonNegativeInteger theT,
int ROIIndex,
int shapeIndex) |
void |
setPointTheZ(ome.xml.model.primitives.NonNegativeInteger theZ,
int ROIIndex,
int shapeIndex) |
void |
setPointTransform(ome.xml.model.AffineTransform transform,
int ROIIndex,
int shapeIndex) |
void |
setPointVisible(java.lang.Boolean visible,
int ROIIndex,
int shapeIndex) |
void |
setPointX(java.lang.Double x,
int ROIIndex,
int shapeIndex) |
void |
setPointY(java.lang.Double y,
int ROIIndex,
int shapeIndex) |
void |
setPolygonFillColor(ome.xml.model.primitives.Color fillColor,
int ROIIndex,
int shapeIndex) |
void |
setPolygonFillRule(ome.xml.model.enums.FillRule fillRule,
int ROIIndex,
int shapeIndex) |
void |
setPolygonFontFamily(ome.xml.model.enums.FontFamily fontFamily,
int ROIIndex,
int shapeIndex) |
void |
setPolygonFontSize(ome.xml.model.primitives.NonNegativeInteger fontSize,
int ROIIndex,
int shapeIndex) |
void |
setPolygonFontStyle(ome.xml.model.enums.FontStyle fontStyle,
int ROIIndex,
int shapeIndex) |
void |
setPolygonID(java.lang.String id,
int ROIIndex,
int shapeIndex) |
void |
setPolygonLineCap(ome.xml.model.enums.LineCap lineCap,
int ROIIndex,
int shapeIndex) |
void |
setPolygonLocked(java.lang.Boolean locked,
int ROIIndex,
int shapeIndex) |
void |
setPolygonPoints(java.lang.String points,
int ROIIndex,
int shapeIndex) |
void |
setPolygonStrokeColor(ome.xml.model.primitives.Color strokeColor,
int ROIIndex,
int shapeIndex) |
void |
setPolygonStrokeDashArray(java.lang.String strokeDashArray,
int ROIIndex,
int shapeIndex) |
void |
setPolygonStrokeWidth(java.lang.Double strokeWidth,
int ROIIndex,
int shapeIndex) |
void |
setPolygonText(java.lang.String text,
int ROIIndex,
int shapeIndex) |
void |
setPolygonTheC(ome.xml.model.primitives.NonNegativeInteger theC,
int ROIIndex,
int shapeIndex) |
void |
setPolygonTheT(ome.xml.model.primitives.NonNegativeInteger theT,
int ROIIndex,
int shapeIndex) |
void |
setPolygonTheZ(ome.xml.model.primitives.NonNegativeInteger theZ,
int ROIIndex,
int shapeIndex) |
void |
setPolygonTransform(ome.xml.model.AffineTransform transform,
int ROIIndex,
int shapeIndex) |
void |
setPolygonVisible(java.lang.Boolean visible,
int ROIIndex,
int shapeIndex) |
void |
setPolylineFillColor(ome.xml.model.primitives.Color fill,
int ROIIndex,
int shapeIndex) |
void |
setPolylineFillRule(ome.xml.model.enums.FillRule fillRule,
int ROIIndex,
int shapeIndex) |
void |
setPolylineFontFamily(ome.xml.model.enums.FontFamily fontFamily,
int ROIIndex,
int shapeIndex) |
void |
setPolylineFontSize(ome.xml.model.primitives.NonNegativeInteger fontSize,
int ROIIndex,
int shapeIndex) |
void |
setPolylineFontStyle(ome.xml.model.enums.FontStyle fontStyle,
int ROIIndex,
int shapeIndex) |
void |
setPolylineID(java.lang.String id,
int ROIIndex,
int shapeIndex) |
void |
setPolylineLineCap(ome.xml.model.enums.LineCap lineCap,
int ROIIndex,
int shapeIndex) |
void |
setPolylineLocked(java.lang.Boolean locked,
int ROIIndex,
int shapeIndex) |
void |
setPolylineMarkerEnd(ome.xml.model.enums.Marker markerEnd,
int ROIIndex,
int shapeIndex) |
void |
setPolylineMarkerStart(ome.xml.model.enums.Marker markerStart,
int ROIIndex,
int shapeIndex) |
void |
setPolylinePoints(java.lang.String points,
int ROIIndex,
int shapeIndex) |
void |
setPolylineStrokeColor(ome.xml.model.primitives.Color stroke,
int ROIIndex,
int shapeIndex) |
void |
setPolylineStrokeDashArray(java.lang.String strokeDashArray,
int ROIIndex,
int shapeIndex) |
void |
setPolylineStrokeWidth(java.lang.Double strokeWidth,
int ROIIndex,
int shapeIndex) |
void |
setPolylineText(java.lang.String text,
int ROIIndex,
int shapeIndex) |
void |
setPolylineTheC(ome.xml.model.primitives.NonNegativeInteger theC,
int ROIIndex,
int shapeIndex) |
void |
setPolylineTheT(ome.xml.model.primitives.NonNegativeInteger theT,
int ROIIndex,
int shapeIndex) |
void |
setPolylineTheZ(ome.xml.model.primitives.NonNegativeInteger theZ,
int ROIIndex,
int shapeIndex) |
void |
setPolylineTransform(ome.xml.model.AffineTransform transform,
int ROIIndex,
int shapeIndex) |
void |
setPolylineVisible(java.lang.Boolean visible,
int ROIIndex,
int shapeIndex) |
void |
setProjectAnnotationRef(java.lang.String annotation,
int projectIndex,
int annotationRefIndex) |
void |
setProjectDatasetRef(java.lang.String dataset,
int projectIndex,
int datasetRefIndex) |
void |
setProjectDescription(java.lang.String description,
int projectIndex) |
void |
setProjectExperimenterGroupRef(java.lang.String group,
int projectIndex) |
void |
setProjectExperimenterRef(java.lang.String experimenter,
int projectIndex) |
void |
setProjectID(java.lang.String id,
int projectIndex) |
void |
setProjectName(java.lang.String name,
int projectIndex) |
void |
setReader(loci.formats.IFormatReader reader)
Sets the Bio-Formats reader that will be used to populate the container
store.
|
void |
setReagentAnnotationRef(java.lang.String annotation,
int screenIndex,
int reagentIndex,
int annotationRefIndex) |
void |
setReagentDescription(java.lang.String description,
int screenIndex,
int reagentIndex) |
void |
setReagentID(java.lang.String id,
int screenIndex,
int reagentIndex) |
void |
setReagentName(java.lang.String name,
int screenIndex,
int reagentIndex) |
void |
setReagentReagentIdentifier(java.lang.String reagentIdentifier,
int screenIndex,
int reagentIndex) |
void |
setRectangleFillColor(ome.xml.model.primitives.Color fill,
int ROIIndex,
int shapeIndex) |
void |
setRectangleFillRule(ome.xml.model.enums.FillRule fillRule,
int ROIIndex,
int shapeIndex) |
void |
setRectangleFontFamily(ome.xml.model.enums.FontFamily fontFamily,
int ROIIndex,
int shapeIndex) |
void |
setRectangleFontSize(ome.xml.model.primitives.NonNegativeInteger fontSize,
int ROIIndex,
int shapeIndex) |
void |
setRectangleFontStyle(ome.xml.model.enums.FontStyle fontStyle,
int ROIIndex,
int shapeIndex) |
void |
setRectangleHeight(java.lang.Double height,
int ROIIndex,
int shapeIndex) |
void |
setRectangleID(java.lang.String id,
int ROIIndex,
int shapeIndex) |
void |
setRectangleLineCap(ome.xml.model.enums.LineCap lineCap,
int ROIIndex,
int shapeIndex) |
void |
setRectangleLocked(java.lang.Boolean locked,
int ROIIndex,
int shapeIndex) |
void |
setRectangleStrokeColor(ome.xml.model.primitives.Color stroke,
int ROIIndex,
int shapeIndex) |
void |
setRectangleStrokeDashArray(java.lang.String strokeDashArray,
int ROIIndex,
int shapeIndex) |
void |
setRectangleStrokeWidth(java.lang.Double strokeWidth,
int ROIIndex,
int shapeIndex) |
void |
setRectangleText(java.lang.String description,
int ROIIndex,
int shapeIndex) |
void |
setRectangleTheC(ome.xml.model.primitives.NonNegativeInteger theC,
int ROIIndex,
int shapeIndex) |
void |
setRectangleTheT(ome.xml.model.primitives.NonNegativeInteger theT,
int ROIIndex,
int shapeIndex) |
void |
setRectangleTheZ(ome.xml.model.primitives.NonNegativeInteger theZ,
int ROIIndex,
int shapeIndex) |
void |
setRectangleTransform(ome.xml.model.AffineTransform transform,
int ROIIndex,
int shapeIndex) |
void |
setRectangleVisible(java.lang.Boolean visible,
int ROIIndex,
int shapeIndex) |
void |
setRectangleWidth(java.lang.Double width,
int ROIIndex,
int shapeIndex) |
void |
setRectangleX(java.lang.Double x,
int ROIIndex,
int shapeIndex) |
void |
setRectangleY(java.lang.Double y,
int ROIIndex,
int shapeIndex) |
void |
setReferenceStringCache(java.util.Map<java.lang.String,java.lang.String[]> referenceStringCache)
Sets the string based reference cache for this container store.
|
void |
setRightsRightsHeld(java.lang.String value) |
void |
setRightsRightsHolder(java.lang.String value) |
void |
setROIAnnotationRef(java.lang.String annotation,
int ROIIndex,
int annotationRefIndex) |
void |
setROIDescription(java.lang.String description,
int ROIIndex) |
void |
setROIID(java.lang.String id,
int ROIIndex) |
void |
setROIName(java.lang.String name,
int ROIIndex) |
void |
setROINamespace(java.lang.String namespace,
int ROIIndex) |
void |
setRoot(ome.xml.meta.MetadataRoot root) |
void |
setRoot(java.lang.Object root)
非推奨です。
|
void |
setScreenAnnotationRef(java.lang.String annotation,
int screenIndex,
int annotationRefIndex) |
void |
setScreenDescription(java.lang.String description,
int screenIndex) |
void |
setScreenID(java.lang.String id,
int screenIndex) |
void |
setScreenName(java.lang.String name,
int screenIndex) |
void |
setScreenPlateRef(java.lang.String plate,
int screenIndex,
int plateRefIndex) |
void |
setScreenProtocolDescription(java.lang.String protocolDescription,
int screenIndex) |
void |
setScreenProtocolIdentifier(java.lang.String protocolIdentifier,
int screenIndex) |
void |
setScreenReagentSetDescription(java.lang.String reagentSetDescription,
int screenIndex) |
void |
setScreenReagentSetIdentifier(java.lang.String reagentSetIdentifier,
int screenIndex) |
void |
setScreenType(java.lang.String type,
int screenIndex) |
void |
setStageLabelName(java.lang.String name,
int imageIndex) |
void |
setStageLabelX(java.lang.Double x,
int imageIndex) |
void |
setStageLabelY(java.lang.Double y,
int imageIndex) |
void |
setStageLabelZ(java.lang.Double z,
int imageIndex) |
void |
setTagAnnotationAnnotationRef(java.lang.String annotation,
int tagAnnotationIndex,
int annotationRefIndex) |
void |
setTagAnnotationAnnotator(java.lang.String value,
int index) |
void |
setTagAnnotationDescription(java.lang.String description,
int tagAnnotationIndex) |
void |
setTagAnnotationID(java.lang.String id,
int tagAnnotationIndex) |
void |
setTagAnnotationNamespace(java.lang.String namespace,
int tagAnnotationIndex) |
void |
setTagAnnotationValue(java.lang.String value,
int tagAnnotationIndex) |
void |
setTermAnnotationAnnotationRef(java.lang.String annotation,
int termAnnotationIndex,
int annotationRefIndex) |
void |
setTermAnnotationAnnotator(java.lang.String value,
int index) |
void |
setTermAnnotationDescription(java.lang.String description,
int termAnnotationIndex) |
void |
setTermAnnotationID(java.lang.String id,
int termAnnotationIndex) |
void |
setTermAnnotationNamespace(java.lang.String namespace,
int termAnnotationIndex) |
void |
setTermAnnotationValue(java.lang.String value,
int termAnnotationIndex) |
void |
setTiffDataFirstC(ome.xml.model.primitives.NonNegativeInteger firstC,
int imageIndex,
int tiffDataIndex) |
void |
setTiffDataFirstT(ome.xml.model.primitives.NonNegativeInteger firstT,
int imageIndex,
int tiffDataIndex) |
void |
setTiffDataFirstZ(ome.xml.model.primitives.NonNegativeInteger firstZ,
int imageIndex,
int tiffDataIndex) |
void |
setTiffDataIFD(ome.xml.model.primitives.NonNegativeInteger ifd,
int imageIndex,
int tiffDataIndex) |
void |
setTiffDataPlaneCount(ome.xml.model.primitives.NonNegativeInteger planeCount,
int imageIndex,
int tiffDataIndex) |
void |
setTile(java.lang.Long pixId,
byte[] arrayBuf,
int z,
int c,
int t,
int x,
int y,
int w,
int h)
Writes a tile of pixels to the server.
|
void |
setTimestampAnnotationAnnotationRef(java.lang.String annotation,
int timestampAnnotationIndex,
int annotationRefIndex) |
void |
setTimestampAnnotationAnnotator(java.lang.String value,
int index) |
void |
setTimestampAnnotationDescription(java.lang.String description,
int timestampAnnotationIndex) |
void |
setTimestampAnnotationID(java.lang.String id,
int timestampAnnotationIndex) |
void |
setTimestampAnnotationNamespace(java.lang.String namespace,
int timestampAnnotationIndex) |
void |
setTimestampAnnotationValue(ome.xml.model.primitives.Timestamp value,
int timestampAnnotationIndex) |
void |
setTransmittanceRangeCutIn(ome.xml.model.primitives.PositiveInteger cutIn,
int instrumentIndex,
int filterIndex) |
void |
setTransmittanceRangeCutInTolerance(ome.xml.model.primitives.NonNegativeInteger cutInTolerance,
int instrumentIndex,
int filterIndex) |
void |
setTransmittanceRangeCutOut(ome.xml.model.primitives.PositiveInteger cutOut,
int instrumentIndex,
int filterIndex) |
void |
setTransmittanceRangeCutOutTolerance(ome.xml.model.primitives.NonNegativeInteger cutOutTolerance,
int instrumentIndex,
int filterIndex) |
void |
setTransmittanceRangeTransmittance(ome.xml.model.primitives.PercentFraction transmittance,
int instrumentIndex,
int filterIndex) |
void |
setUserSpecifiedAnnotations(java.util.List<omero.model.Annotation> annotations)
Sets the user specified image annotations.
|
void |
setUserSpecifiedDescription(java.lang.String description)
Sets the user specified image/plate description.
|
void |
setUserSpecifiedName(java.lang.String name)
Sets the user specified image/plate name.
|
void |
setUserSpecifiedPhysicalPixelSizes(java.lang.Double physicalSizeX,
java.lang.Double physicalSizeY,
java.lang.Double physicalSizeZ)
Sets the user specified physical pixel sizes.
|
void |
setUserSpecifiedTarget(omero.model.IObject target)
Sets the user specified linkage target (usually a Dataset for Images
and a Screen for Plates).
|
void |
setUUID(java.lang.String uuid) |
void |
setUUIDFileName(java.lang.String fileName,
int imageIndex,
int tiffDataIndex) |
void |
setUUIDValue(java.lang.String fileName,
int imageIndex,
int tiffDataIndex) |
void |
setWellAnnotationRef(java.lang.String annotation,
int plateIndex,
int wellIndex,
int annotationRefIndex) |
void |
setWellColor(ome.xml.model.primitives.Color color,
int plateIndex,
int wellIndex) |
void |
setWellColumn(ome.xml.model.primitives.NonNegativeInteger column,
int plateIndex,
int wellIndex) |
void |
setWellExternalDescription(java.lang.String externalDescription,
int plateIndex,
int wellIndex) |
void |
setWellExternalIdentifier(java.lang.String externalIdentifier,
int plateIndex,
int wellIndex) |
void |
setWellID(java.lang.String id,
int plateIndex,
int wellIndex) |
void |
setWellReagentRef(java.lang.String reagent,
int plateIndex,
int wellIndex) |
void |
setWellRow(ome.xml.model.primitives.NonNegativeInteger row,
int plateIndex,
int wellIndex) |
void |
setWellSampleAnnotationRef(java.lang.String annotation,
int plateIndex,
int wellIndex,
int wellSampleIndex,
int annotationRefIndex) |
void |
setWellSampleID(java.lang.String id,
int plateIndex,
int wellIndex,
int wellSampleIndex) |
void |
setWellSampleImageRef(java.lang.String image,
int plateIndex,
int wellIndex,
int wellSampleIndex) |
void |
setWellSampleIndex(ome.xml.model.primitives.NonNegativeInteger index,
int plateIndex,
int wellIndex,
int wellSampleIndex) |
void |
setWellSamplePositionX(java.lang.Double positionX,
int plateIndex,
int wellIndex,
int wellSampleIndex) |
void |
setWellSamplePositionY(java.lang.Double positionY,
int plateIndex,
int wellIndex,
int wellSampleIndex) |
void |
setWellSampleTimepoint(ome.xml.model.primitives.Timestamp timepoint,
int plateIndex,
int wellIndex,
int wellSampleIndex) |
void |
setWellStatus(java.lang.String status,
int plateIndex,
int wellIndex) |
void |
setWellType(java.lang.String type,
int plateIndex,
int wellIndex) |
void |
setXMLAnnotationAnnotationRef(java.lang.String annotation,
int XMLAnnotationIndex,
int annotationRefIndex) |
void |
setXMLAnnotationAnnotator(java.lang.String value,
int index) |
void |
setXMLAnnotationDescription(java.lang.String description,
int XMLAnnotationIndex) |
void |
setXMLAnnotationID(java.lang.String id,
int XMLAnnotationIndex) |
void |
setXMLAnnotationNamespace(java.lang.String namespace,
int XMLAnnotationIndex) |
void |
setXMLAnnotationValue(java.lang.String value,
int XMLAnnotationIndex) |
omero.RString |
toRType(ome.xml.model.AffineTransform value)
Transforms a Java type into the corresponding OMERO RType.
|
omero.RBool |
toRType(java.lang.Boolean value)
Transforms a Java type into the corresponding OMERO RType.
|
omero.RInt |
toRType(ome.xml.model.primitives.Color value)
Transforms a Java type into the corresponding OMERO RType.
|
omero.RDouble |
toRType(java.lang.Double value)
Transforms a Java type into the corresponding OMERO RType.
|
omero.RDouble |
toRType(java.lang.Float value)
Transforms a Java type into the corresponding OMERO RType.
|
omero.RInt |
toRType(java.lang.Integer value)
Transforms a Java type into the corresponding OMERO RType.
|
omero.RLong |
toRType(java.lang.Long value)
Transforms a Java type into the corresponding OMERO RType.
|
omero.RString |
toRType(ome.xml.model.enums.NamingConvention value)
Transforms a Java type into the corresponding OMERO RType.
|
omero.RInt |
toRType(ome.xml.model.primitives.NonNegativeInteger value)
Transforms a Java type into the corresponding OMERO RType.
|
omero.RLong |
toRType(ome.xml.model.primitives.NonNegativeLong value)
Transforms a Java type into the corresponding OMERO RType.
|
omero.RDouble |
toRType(ome.xml.model.primitives.PercentFraction value)
Transforms a Java type into the corresponding OMERO RType.
|
omero.RDouble |
toRType(ome.xml.model.primitives.PositiveFloat value)
Transforms a Java type into the corresponding OMERO RType.
|
omero.RString |
toRType(java.lang.String value)
Transforms a Java type into the corresponding OMERO RType.
|
omero.RTime |
toRType(ome.xml.model.primitives.Timestamp value)
Transforms a Java type into the corresponding OMERO RType.
|
void |
updateFileSize(omero.model.OriginalFile file,
long size) |
void |
updatePixels(java.util.List<omero.model.Pixels> pixelsList)
Updates a list of Pixels.
|
public static final java.lang.String OMERO_EMISSION_FILTER_SUFFIX
public static final java.lang.String OMERO_EXCITATION_FILTER_SUFFIX
public ClientKeepAlive getKeepAlive()
public void logVersionInfo(java.lang.String clientVersion) throws omero.ServerError
omero.ServerError
public int getDefaultBatchSize()
DEFAULTBATCHSIZE
if none is set.public int getDefaultBlockSize()
DEFAULTBLOCKSIZE
if none is set.public omero.api.IQueryPrx getIQuery()
public void setEncryptedConnection(boolean encryptedConnection)
public boolean isEncryptedConnection()
public java.lang.Long setGroup(java.lang.Long groupID)
initializeServices(boolean)
to set the call context for all services. If null, the call context
will be left which will then use the context of the session.groupID
- public void initialize(omero.api.ServiceFactoryPrx serviceFactory) throws omero.ServerError
closeServices()
.serviceFactory
- The factory. Mustn't be null
.omero.ServerError
public void initialize(client c) throws omero.ServerError
closeServices()
.c
- The client. Mustn't be null
.omero.ServerError
public void initialize(java.lang.String username, java.lang.String password, java.lang.String server, int port) throws Glacier2.CannotCreateSessionException, Glacier2.PermissionDeniedException, omero.ServerError
logout()
username
- User's omename.password
- User's password.server
- Server hostname.port
- Server port.Glacier2.CannotCreateSessionException
- If there is a session error when
creating the OMERO Blitz client object.Glacier2.PermissionDeniedException
- If there is a problem logging the user
in.omero.ServerError
- If there is a critical error communicating with the
server.public void initialize(java.lang.String username, java.lang.String password, java.lang.String server, int port, boolean isSecure) throws Glacier2.CannotCreateSessionException, Glacier2.PermissionDeniedException, omero.ServerError
logout()
username
- User's omename.password
- User's password.server
- Server hostname.port
- Server port.isSecure
- is this session secureGlacier2.CannotCreateSessionException
- If there is a session error when
creating the OMERO Blitz client object.Glacier2.PermissionDeniedException
- If there is a problem logging the user
in.omero.ServerError
- If there is a critical error communicating with the
server.public void initialize(java.lang.String username, java.lang.String password, java.lang.String server, int port, java.lang.Long group, boolean isSecure) throws Glacier2.CannotCreateSessionException, Glacier2.PermissionDeniedException, omero.ServerError
logout()
username
- User's omename.password
- User's password.server
- Server hostname.port
- Server port.group
- User's current group.isSecure
- is this session secureGlacier2.CannotCreateSessionException
- If there is a session error when
creating the OMERO Blitz client object.Glacier2.PermissionDeniedException
- If there is a problem logging the user
in.omero.ServerError
- If there is a critical error communicating with the
server.public void initialize(java.lang.String server, int port, java.lang.String sessionKey) throws Glacier2.CannotCreateSessionException, Glacier2.PermissionDeniedException, omero.ServerError
logout()
server
- Server hostname.port
- Server port.sessionKey
- Bind session key.Glacier2.CannotCreateSessionException
Glacier2.PermissionDeniedException
omero.ServerError
public void initialize(java.lang.String server, int port, java.lang.String sessionKey, boolean isSecure) throws Glacier2.CannotCreateSessionException, Glacier2.PermissionDeniedException, omero.ServerError
logout()
server
- Server hostname.port
- Server port.sessionKey
- Bind session key.Glacier2.CannotCreateSessionException
Glacier2.PermissionDeniedException
omero.ServerError
public omero.api.ServiceFactoryPrx getServiceFactory()
public void ping()
public void updateFileSize(omero.model.OriginalFile file, long size) throws omero.ServerError
omero.ServerError
public void attachCompanionFilesToImage(omero.model.Fileset fs, java.util.List<omero.model.Image> imageList) throws omero.ServerError
reader
object to obtain
a list of companion files from the current image. Resolves the name of
the file into an OriginalFile and tries to link to the image in the DB.imageList
- A list of image to which companion files will be
attached.omero.ServerError
public void setEnumerationProvider(EnumerationProvider enumProvider)
enumProvider
- Enumeration provider to use.public EnumerationProvider getEnumerationProvider()
public void setInstanceProvider(InstanceProvider instanceProvider)
enumProvider
- Enumeration provider to use.public InstanceProvider getInstanceProvider()
public omero.RInt toRType(java.lang.Integer value)
value
- Java concrete type value.null
if value
is
null
.public omero.RInt toRType(ome.xml.model.primitives.NonNegativeInteger value)
value
- Java concrete type value.null
if value
is
null
.public omero.RLong toRType(ome.xml.model.primitives.NonNegativeLong value)
value
- Java concrete type value.null
if value
is
null
.public omero.RDouble toRType(ome.xml.model.primitives.PositiveFloat value)
value
- Java concrete type value.null
if value
is
null
.public omero.RDouble toRType(ome.xml.model.primitives.PercentFraction value)
value
- Java concrete type value.null
if value
is
null
.public omero.RLong toRType(java.lang.Long value)
value
- Java concrete type value.null
if value
is
null
.public omero.RString toRType(java.lang.String value)
value
- Java concrete type value.null
if value
is
null
.public omero.RBool toRType(java.lang.Boolean value)
value
- Java concrete type value.null
if value
is
null
.public omero.RDouble toRType(java.lang.Double value)
value
- Java concrete type value.null
if value
is
null
.public omero.RDouble toRType(java.lang.Float value)
value
- Java concrete type value.null
if value
is
null
.public omero.RTime toRType(ome.xml.model.primitives.Timestamp value)
value
- Java concrete type value.null
if value
is
null
.public omero.RString toRType(ome.xml.model.enums.NamingConvention value)
value
- Java concrete type value.null
if value
is
null
.public omero.RString toRType(ome.xml.model.AffineTransform value)
value
- Java concrete type value.null
if value
is
null
.public omero.RInt toRType(ome.xml.model.primitives.Color value)
value
- Java concrete type value.null
if value
is
null
.public void closeServices()
public void logout()
client
or a ServiceFactoryPrx
instance. * @see
#initialize(client)public void prepare(java.util.Map<java.lang.Integer,omero.model.Image> existingMetadata)
prepare()
is only valid for
a SINGLE importImage()
execution. Following
importImage()
the existing metadata map will be reset
regardless of success or failure.existingMetadata
- Map of imageIndex or series vs. populated Image
source graph with the fetched objects defined above.public void createRoot()
createRoot
インタフェース内 ome.xml.meta.MetadataStore
public ome.xml.meta.MetadataRoot getRoot()
getRoot
インタフェース内 ome.xml.meta.MetadataStore
public loci.formats.IFormatReader getReader()
IObjectContainerStore
getReader
インタフェース内 IObjectContainerStore
public void setReader(loci.formats.IFormatReader reader)
IObjectContainerStore
setReader
インタフェース内 IObjectContainerStore
reader
- Bio-Formats reader.public java.util.List<omero.model.Annotation> getUserSpecifiedAnnotations()
IObjectContainerStore
getUserSpecifiedAnnotations
インタフェース内 IObjectContainerStore
public void setUserSpecifiedAnnotations(java.util.List<omero.model.Annotation> annotations)
IObjectContainerStore
setUserSpecifiedAnnotations
インタフェース内 IObjectContainerStore
annotations
- user specified annotationspublic java.lang.String getUserSpecifiedName()
IObjectContainerStore
getUserSpecifiedName
インタフェース内 IObjectContainerStore
public java.lang.String getUserSpecifiedImageName()
public void setUserSpecifiedName(java.lang.String name)
IObjectContainerStore
setUserSpecifiedName
インタフェース内 IObjectContainerStore
name
- user specified image/plate namepublic java.lang.String getUserSpecifiedDescription()
IObjectContainerStore
getUserSpecifiedDescription
インタフェース内 IObjectContainerStore
public void setUserSpecifiedDescription(java.lang.String description)
IObjectContainerStore
setUserSpecifiedDescription
インタフェース内 IObjectContainerStore
public omero.model.IObject getUserSpecifiedTarget()
IObjectContainerStore
getUserSpecifiedTarget
インタフェース内 IObjectContainerStore
public void setUserSpecifiedTarget(omero.model.IObject target)
IObjectContainerStore
setUserSpecifiedTarget
インタフェース内 IObjectContainerStore
public java.lang.Double[] getUserSpecifiedPhysicalPixelSizes()
IObjectContainerStore
getUserSpecifiedPhysicalPixelSizes
インタフェース内 IObjectContainerStore
null
for any one index states the user has not made a choice for the size
of that particular dimension.public void setUserSpecifiedPhysicalPixelSizes(java.lang.Double physicalSizeX, java.lang.Double physicalSizeY, java.lang.Double physicalSizeZ)
IObjectContainerStore
null
states the original file physical size for that
dimension should be used.setUserSpecifiedPhysicalPixelSizes
インタフェース内 IObjectContainerStore
physicalSizeX
- Physical pixel size width.physicalSizeY
- Physical pixel height.physicalSizeZ
- Physical pixel depth.public java.util.List<ModelProcessor> getModelProcessors()
public void setModelProcessors(java.util.List<ModelProcessor> modelProcessors)
modelProcessors
- List of model processors to use.public void removeModelProcessor(ModelProcessor processor)
processor
- Model processor to remove.public boolean addModelProcessor(ModelProcessor processor)
processor
- Model processor to add.true
as specified by Collection.add(E)
.public java.util.Map<ome.util.LSID,omero.metadatastore.IObjectContainer> getContainerCache()
IObjectContainerStore
getContainerCache
インタフェース内 IObjectContainerStore
public java.util.Map<ome.util.LSID,java.util.List<ome.util.LSID>> getReferenceCache()
IObjectContainerStore
getReferenceCache
インタフェース内 IObjectContainerStore
public java.util.Map<java.lang.Class<? extends omero.model.IObject>,java.util.Map<java.lang.String,omero.metadatastore.IObjectContainer>> getAuthoritativeContainerCache()
IObjectContainerStore
getAuthoritativeContainerCache
インタフェース内 IObjectContainerStore
public void addReference(ome.util.LSID source, ome.util.LSID target)
addReference
インタフェース内 IObjectContainerStore
source
- Source LSID to add.target
- Target LSID to add.public java.util.Map<java.lang.String,java.lang.String[]> getReferenceStringCache()
IObjectContainerStore
getReferenceStringCache
インタフェース内 IObjectContainerStore
public void setReferenceStringCache(java.util.Map<java.lang.String,java.lang.String[]> referenceStringCache)
IObjectContainerStore
setReferenceStringCache
インタフェース内 IObjectContainerStore
referenceStringCache
- String based reference cache to use.public omero.model.IObject getSourceObject(ome.util.LSID LSID)
IObjectContainerStore
getSourceObject
インタフェース内 IObjectContainerStore
LSID
- LSID to retrieve a source object for.public <T extends omero.model.IObject> java.util.List<T> getSourceObjects(java.lang.Class<T> klass)
IObjectContainerStore
getSourceObjects
インタフェース内 IObjectContainerStore
klass
- Class to retrieve source objects for.public boolean hasReference(ome.util.LSID source, ome.util.LSID target)
IObjectContainerStore
hasReference
インタフェース内 IObjectContainerStore
source
- LSID of the source object.target
- LSID of the target object.true
if a reference exists, false
otherwise.public void setPixelsParams(long pixelsId, int series, java.lang.String targetName)
pixelsId
- The pixels set identifier.series
- The series number to populate.target
- The setId()
target.prefix
- Prefix within the binary repository for all files.public void setPixelsParams(long pixelsId, int series, java.lang.String targetName, java.lang.String repoUuid)
pixelsId
- The pixels set identifier.series
- The series number to populate.target
- The setId()
target.prefix
- Prefix within the binary repository for all files.public void setCurrentGroup(long groupID) throws omero.ServerError
groupID
- The id of the group.java.lang.Exception
- If an error occurred while trying to
retrieve data from OMERO service.omero.ServerError
public java.util.Map<java.lang.Long,java.lang.String> mapUserGroups() throws omero.ServerError
omero.ServerError
public java.lang.String getDefaultGroupName() throws omero.ServerError
omero.ServerError
public int getDefaultGroupLevel() throws omero.ServerError
omero.ServerError
public long getRepositorySpace()
public void postProcess()
saveToDB()
.public java.util.Map<java.lang.String,java.util.List<omero.model.IObject>> saveToDB(omero.model.FilesetJobLink link)
public java.util.List<omero.grid.InteractiveProcessorPrx> launchProcessing()
public <T extends omero.model.IObject> T getTarget(java.lang.Class<T> klass, long id)
T
- klass
- id
- public omero.model.Project getProject(long projectId)
projectId
- public omero.model.Dataset addDataset(java.lang.String datasetName, java.lang.String datasetDescription, omero.model.Project project)
datasetName
- datasetDescription
- project
- public long getExperimenterID()
public java.lang.String getConfigValue(java.lang.String key)
IConfig
service.key
- Key for the string encoded value.public java.util.List<omero.model.Screen> getScreens()
public java.util.List<omero.model.Project> getProjects()
public java.util.List<omero.model.Dataset> getDatasets(omero.model.Project p)
p
- public java.util.List<omero.model.Dataset> getDatasetsWithoutProjects()
public omero.model.Project addProject(java.lang.String projectName, java.lang.String projectDescription)
projectName
- projectDescription
- public omero.model.Screen addScreen(java.lang.String screenName, java.lang.String screenDescription)
screenName
- screenDescription
- public void preparePixelsStore(java.util.List<java.lang.Long> pixelsIds)
pixelsIds
- List of Pixels IDs we'll be populating.public void finalizePixelStore() throws omero.ServerError
omero.ServerError
ticket:5594
public int[] getTileSize(java.lang.Long pixId) throws omero.ServerError
pixId
- Pixels set to write to.omero.ServerError
- If there is an error writing this tile to the
server.public void setTile(java.lang.Long pixId, byte[] arrayBuf, int z, int c, int t, int x, int y, int w, int h) throws omero.ServerError
pixId
- Pixels set to write to.arrayBuf
- Byte array containing all pixels for this plane.z
- Z offset within the Pixels set.c
- Channel offset within the Pixels set.t
- Timepoint offset within the Pixels set.x
- X offset of the tile.y
- Y offset of the tile.w
- Width of the tile.h
- Height of the tile.omero.ServerError
- If there is an error writing this tile to the
server.setPlane(Long, byte[], int, int, int)
public void setPlane(java.lang.Long pixId, byte[] arrayBuf, int z, int c, int t) throws omero.ServerError
pixId
- Pixels set to write to.arrayBuf
- Byte array containing all pixels for this plane.z
- Z offset within the Pixels set.c
- Channel offset within the Pixels set.t
- Timepoint offset within the Pixels set.omero.ServerError
- If there is an error writing this plane to the
server.public void setChannelGlobalMinMax(int channel, double minimum, double maximum, int series)
setChannelGlobalMinMax
インタフェース内 loci.formats.meta.IMinMaxStore
public void updatePixels(java.util.List<omero.model.Pixels> pixelsList)
pixelsList
- List of Pixels to update.public void populateMinMax()
public void resetDefaultsAndGenerateThumbnails(java.util.List<java.lang.Long> plateIds, java.util.List<java.lang.Long> pixelsIds)
plateIds
- Set of Plate IDs to reset defaults and thumbnails for.pixelsIds
- Set of Pixels IDs to reset defaults and thumbnails for.public omero.metadatastore.IObjectContainer getIObjectContainer(java.lang.Class<? extends omero.model.IObject> klass, java.util.LinkedHashMap<Index,java.lang.Integer> indexes)
IObjectContainerStore
getIObjectContainer
インタフェース内 IObjectContainerStore
klass
- Class to retrieve a container for.indexes
- Indexes into the OME-XML data model.public void removeIObjectContainer(ome.util.LSID lsid)
IObjectContainerStore
removeIObjectContainer
インタフェース内 IObjectContainerStore
lsid
- LSID of the container to remove.public java.util.List<omero.metadatastore.IObjectContainer> getIObjectContainers(java.lang.Class<? extends omero.model.IObject> klass)
IObjectContainerStore
getIObjectContainers
インタフェース内 IObjectContainerStore
klass
- Class to retrieve containers for.public int countCachedContainers(java.lang.Class<? extends omero.model.IObject> klass, int... indexes)
IObjectContainerStore
countCachedContainers
インタフェース内 IObjectContainerStore
klass
- Class to count containers of.indexes
- Indexes to use in the container count. For example, if
klass
is Image
and indexes is
int[] { 0 };
only containers that have an LSID of type
Image
and a first index of 0
will be counted.public int countCachedReferences(java.lang.Class<? extends omero.model.IObject> source, java.lang.Class<? extends omero.model.IObject> target)
IObjectContainerStore
countCachedReferences
インタフェース内 IObjectContainerStore
source
- Class of the source object. If null
it is
treated as a wild card, all references whose target match
target
will be counted.target
- Class of the target object. If null
it is
treated as a wild card, all references whose source match
source
will be counted.public void setArcID(java.lang.String id, int instrumentIndex, int lightSourceIndex)
setArcID
インタフェース内 ome.xml.meta.MetadataStore
public void setArcLotNumber(java.lang.String lotNumber, int instrumentIndex, int lightSourceIndex)
setArcLotNumber
インタフェース内 ome.xml.meta.MetadataStore
public void setArcManufacturer(java.lang.String manufacturer, int instrumentIndex, int lightSourceIndex)
setArcManufacturer
インタフェース内 ome.xml.meta.MetadataStore
public void setArcModel(java.lang.String model, int instrumentIndex, int lightSourceIndex)
setArcModel
インタフェース内 ome.xml.meta.MetadataStore
public void setArcPower(java.lang.Double power, int instrumentIndex, int lightSourceIndex)
setArcPower
インタフェース内 ome.xml.meta.MetadataStore
public void setArcSerialNumber(java.lang.String serialNumber, int instrumentIndex, int lightSourceIndex)
setArcSerialNumber
インタフェース内 ome.xml.meta.MetadataStore
public void setArcType(ome.xml.model.enums.ArcType type, int instrumentIndex, int lightSourceIndex)
setArcType
インタフェース内 ome.xml.meta.MetadataStore
public void setBooleanAnnotationID(java.lang.String id, int booleanAnnotationIndex)
setBooleanAnnotationID
インタフェース内 ome.xml.meta.MetadataStore
public void setBooleanAnnotationNamespace(java.lang.String namespace, int booleanAnnotationIndex)
setBooleanAnnotationNamespace
インタフェース内 ome.xml.meta.MetadataStore
public void setBooleanAnnotationValue(java.lang.Boolean value, int booleanAnnotationIndex)
setBooleanAnnotationValue
インタフェース内 ome.xml.meta.MetadataStore
public void setBinaryOnlyUUID(java.lang.String uuid)
setBinaryOnlyUUID
インタフェース内 ome.xml.meta.MetadataStore
public void setBinaryOnlyMetadataFile(java.lang.String metadataFile)
setBinaryOnlyMetadataFile
インタフェース内 ome.xml.meta.MetadataStore
public omero.model.Channel getChannel(int imageIndex, int channelIndex)
public void setChannelID(java.lang.String id, int imageIndex, int channelIndex)
setChannelID
インタフェース内 ome.xml.meta.MetadataStore
public void setChannelAcquisitionMode(ome.xml.model.enums.AcquisitionMode acquisitionMode, int imageIndex, int channelIndex)
setChannelAcquisitionMode
インタフェース内 ome.xml.meta.MetadataStore
public void setChannelColor(ome.xml.model.primitives.Color color, int imageIndex, int channelIndex)
setChannelColor
インタフェース内 ome.xml.meta.MetadataStore
public void setChannelContrastMethod(ome.xml.model.enums.ContrastMethod contrastMethod, int imageIndex, int channelIndex)
setChannelContrastMethod
インタフェース内 ome.xml.meta.MetadataStore
public void setChannelEmissionWavelength(ome.xml.model.primitives.PositiveInteger emissionWavelength, int imageIndex, int channelIndex)
setChannelEmissionWavelength
インタフェース内 ome.xml.meta.MetadataStore
public void setChannelExcitationWavelength(ome.xml.model.primitives.PositiveInteger excitationWavelength, int imageIndex, int channelIndex)
setChannelExcitationWavelength
インタフェース内 ome.xml.meta.MetadataStore
MetadataStore.setChannelExcitationWavelength(ome.xml.model.primitives.PositiveInteger, int, int)
public void setChannelFilterSetRef(java.lang.String filterSet, int imageIndex, int channelIndex)
setChannelFilterSetRef
インタフェース内 ome.xml.meta.MetadataStore
public void setChannelFluor(java.lang.String fluor, int imageIndex, int channelIndex)
setChannelFluor
インタフェース内 ome.xml.meta.MetadataStore
public void setChannelIlluminationType(ome.xml.model.enums.IlluminationType illuminationType, int imageIndex, int channelIndex)
setChannelIlluminationType
インタフェース内 ome.xml.meta.MetadataStore
public void setChannelNDFilter(java.lang.Double ndfilter, int imageIndex, int channelIndex)
setChannelNDFilter
インタフェース内 ome.xml.meta.MetadataStore
public void setChannelName(java.lang.String name, int imageIndex, int channelIndex)
setChannelName
インタフェース内 ome.xml.meta.MetadataStore
public void setChannelPinholeSize(java.lang.Double pinholeSize, int imageIndex, int channelIndex)
setChannelPinholeSize
インタフェース内 ome.xml.meta.MetadataStore
public void setChannelPockelCellSetting(java.lang.Integer pockelCellSetting, int imageIndex, int channelIndex)
setChannelPockelCellSetting
インタフェース内 ome.xml.meta.MetadataStore
public void setChannelSamplesPerPixel(ome.xml.model.primitives.PositiveInteger samplesPerPixel, int imageIndex, int channelIndex)
setChannelSamplesPerPixel
インタフェース内 ome.xml.meta.MetadataStore
public void setChannelAnnotationRef(java.lang.String annotation, int imageIndex, int channelIndex, int annotationRefIndex)
setChannelAnnotationRef
インタフェース内 ome.xml.meta.MetadataStore
public void setChannelLightSourceSettingsID(java.lang.String id, int imageIndex, int channelIndex)
setChannelLightSourceSettingsID
インタフェース内 ome.xml.meta.MetadataStore
public void setChannelLightSourceSettingsAttenuation(ome.xml.model.primitives.PercentFraction attenuation, int imageIndex, int channelIndex)
setChannelLightSourceSettingsAttenuation
インタフェース内 ome.xml.meta.MetadataStore
public void setChannelLightSourceSettingsWavelength(ome.xml.model.primitives.PositiveInteger wavelength, int imageIndex, int channelIndex)
setChannelLightSourceSettingsWavelength
インタフェース内 ome.xml.meta.MetadataStore
public void setDatasetID(java.lang.String id, int datasetIndex)
setDatasetID
インタフェース内 ome.xml.meta.MetadataStore
public void setDatasetAnnotationRef(java.lang.String annotation, int datasetIndex, int annotationRefIndex)
setDatasetAnnotationRef
インタフェース内 ome.xml.meta.MetadataStore
public void setDatasetDescription(java.lang.String description, int datasetIndex)
setDatasetDescription
インタフェース内 ome.xml.meta.MetadataStore
public void setDatasetExperimenterRef(java.lang.String experimenter, int datasetIndex)
setDatasetExperimenterRef
インタフェース内 ome.xml.meta.MetadataStore
public void setDatasetExperimenterGroupRef(java.lang.String group, int datasetIndex)
setDatasetExperimenterGroupRef
インタフェース内 ome.xml.meta.MetadataStore
public void setDatasetName(java.lang.String name, int datasetIndex)
setDatasetName
インタフェース内 ome.xml.meta.MetadataStore
public omero.model.Detector getDetector(int instrumentIndex, int detectorIndex)
instrumentIndex
- detectorIndex
- public void setDetectorID(java.lang.String id, int instrumentIndex, int detectorIndex)
setDetectorID
インタフェース内 ome.xml.meta.MetadataStore
public void setDetectorAmplificationGain(java.lang.Double amplificationGain, int instrumentIndex, int detectorIndex)
setDetectorAmplificationGain
インタフェース内 ome.xml.meta.MetadataStore
public void setDetectorGain(java.lang.Double gain, int instrumentIndex, int detectorIndex)
setDetectorGain
インタフェース内 ome.xml.meta.MetadataStore
public void setDetectorLotNumber(java.lang.String lotNumber, int instrumentIndex, int detectorIndex)
setDetectorLotNumber
インタフェース内 ome.xml.meta.MetadataStore
public void setDetectorManufacturer(java.lang.String manufacturer, int instrumentIndex, int detectorIndex)
setDetectorManufacturer
インタフェース内 ome.xml.meta.MetadataStore
public void setDetectorModel(java.lang.String model, int instrumentIndex, int detectorIndex)
setDetectorModel
インタフェース内 ome.xml.meta.MetadataStore
public void setDetectorOffset(java.lang.Double offset, int instrumentIndex, int detectorIndex)
setDetectorOffset
インタフェース内 ome.xml.meta.MetadataStore
public void setDetectorSerialNumber(java.lang.String serialNumber, int instrumentIndex, int detectorIndex)
setDetectorSerialNumber
インタフェース内 ome.xml.meta.MetadataStore
public void setDetectorType(ome.xml.model.enums.DetectorType type, int instrumentIndex, int detectorIndex)
setDetectorType
インタフェース内 ome.xml.meta.MetadataStore
public void setDetectorVoltage(java.lang.Double voltage, int instrumentIndex, int detectorIndex)
setDetectorVoltage
インタフェース内 ome.xml.meta.MetadataStore
public void setDetectorZoom(java.lang.Double zoom, int instrumentIndex, int detectorIndex)
setDetectorZoom
インタフェース内 ome.xml.meta.MetadataStore
public void setDetectorSettingsID(java.lang.String id, int imageIndex, int channelIndex)
setDetectorSettingsID
インタフェース内 ome.xml.meta.MetadataStore
public void setDetectorSettingsBinning(ome.xml.model.enums.Binning binning, int imageIndex, int channelIndex)
setDetectorSettingsBinning
インタフェース内 ome.xml.meta.MetadataStore
public void setDetectorSettingsGain(java.lang.Double gain, int imageIndex, int channelIndex)
setDetectorSettingsGain
インタフェース内 ome.xml.meta.MetadataStore
public void setDetectorSettingsIntegration(ome.xml.model.primitives.PositiveInteger integration, int imageIndex, int channelIndex)
setDetectorSettingsIntegration
インタフェース内 ome.xml.meta.MetadataStore
public void setDetectorSettingsOffset(java.lang.Double offset, int imageIndex, int channelIndex)
setDetectorSettingsOffset
インタフェース内 ome.xml.meta.MetadataStore
public void setDetectorSettingsReadOutRate(java.lang.Double readOutRate, int imageIndex, int channelIndex)
setDetectorSettingsReadOutRate
インタフェース内 ome.xml.meta.MetadataStore
public void setDetectorSettingsVoltage(java.lang.Double voltage, int imageIndex, int channelIndex)
setDetectorSettingsVoltage
インタフェース内 ome.xml.meta.MetadataStore
public void setDetectorSettingsZoom(java.lang.Double zoom, int imageIndex, int channelIndex)
setDetectorSettingsZoom
インタフェース内 ome.xml.meta.MetadataStore
public void setDichroicID(java.lang.String id, int instrumentIndex, int dichroicIndex)
setDichroicID
インタフェース内 ome.xml.meta.MetadataStore
public void setDichroicLotNumber(java.lang.String lotNumber, int instrumentIndex, int dichroicIndex)
setDichroicLotNumber
インタフェース内 ome.xml.meta.MetadataStore
public void setDichroicManufacturer(java.lang.String manufacturer, int instrumentIndex, int dichroicIndex)
setDichroicManufacturer
インタフェース内 ome.xml.meta.MetadataStore
public void setDichroicModel(java.lang.String model, int instrumentIndex, int dichroicIndex)
setDichroicModel
インタフェース内 ome.xml.meta.MetadataStore
public void setDichroicSerialNumber(java.lang.String serialNumber, int instrumentIndex, int dichroicIndex)
setDichroicSerialNumber
インタフェース内 ome.xml.meta.MetadataStore
public void setDoubleAnnotationID(java.lang.String id, int doubleAnnotationIndex)
setDoubleAnnotationID
インタフェース内 ome.xml.meta.MetadataStore
public void setDoubleAnnotationNamespace(java.lang.String namespace, int doubleAnnotationIndex)
setDoubleAnnotationNamespace
インタフェース内 ome.xml.meta.MetadataStore
public void setDoubleAnnotationValue(java.lang.Double value, int doubleAnnotationIndex)
setDoubleAnnotationValue
インタフェース内 ome.xml.meta.MetadataStore
public void setEllipseID(java.lang.String id, int ROIIndex, int shapeIndex)
setEllipseID
インタフェース内 ome.xml.meta.MetadataStore
public void setEllipseDescription(java.lang.String description, int ROIIndex, int shapeIndex)
public void setEllipseFillColor(ome.xml.model.primitives.Color fill, int ROIIndex, int shapeIndex)
setEllipseFillColor
インタフェース内 ome.xml.meta.MetadataStore
public void setEllipseFontSize(ome.xml.model.primitives.NonNegativeInteger fontSize, int ROIIndex, int shapeIndex)
setEllipseFontSize
インタフェース内 ome.xml.meta.MetadataStore
public void setEllipseText(java.lang.String text, int ROIIndex, int shapeIndex)
setEllipseText
インタフェース内 ome.xml.meta.MetadataStore
public void setEllipseRadiusX(java.lang.Double radiusX, int ROIIndex, int shapeIndex)
setEllipseRadiusX
インタフェース内 ome.xml.meta.MetadataStore
public void setEllipseRadiusY(java.lang.Double radiusY, int ROIIndex, int shapeIndex)
setEllipseRadiusY
インタフェース内 ome.xml.meta.MetadataStore
public void setEllipseStrokeColor(ome.xml.model.primitives.Color stroke, int ROIIndex, int shapeIndex)
setEllipseStrokeColor
インタフェース内 ome.xml.meta.MetadataStore
public void setEllipseStrokeDashArray(java.lang.String strokeDashArray, int ROIIndex, int shapeIndex)
setEllipseStrokeDashArray
インタフェース内 ome.xml.meta.MetadataStore
public void setEllipseStrokeWidth(java.lang.Double strokeWidth, int ROIIndex, int shapeIndex)
setEllipseStrokeWidth
インタフェース内 ome.xml.meta.MetadataStore
public void setEllipseTheC(ome.xml.model.primitives.NonNegativeInteger theC, int ROIIndex, int shapeIndex)
setEllipseTheC
インタフェース内 ome.xml.meta.MetadataStore
public void setEllipseTheT(ome.xml.model.primitives.NonNegativeInteger theT, int ROIIndex, int shapeIndex)
setEllipseTheT
インタフェース内 ome.xml.meta.MetadataStore
public void setEllipseTheZ(ome.xml.model.primitives.NonNegativeInteger theZ, int ROIIndex, int shapeIndex)
setEllipseTheZ
インタフェース内 ome.xml.meta.MetadataStore
public void setEllipseTransform(ome.xml.model.AffineTransform transform, int ROIIndex, int shapeIndex)
setEllipseTransform
インタフェース内 ome.xml.meta.MetadataStore
public void setEllipseX(java.lang.Double x, int ROIIndex, int shapeIndex)
setEllipseX
インタフェース内 ome.xml.meta.MetadataStore
public void setEllipseY(java.lang.Double y, int ROIIndex, int shapeIndex)
setEllipseY
インタフェース内 ome.xml.meta.MetadataStore
public void setExperimentID(java.lang.String id, int experimentIndex)
setExperimentID
インタフェース内 ome.xml.meta.MetadataStore
public void setExperimentDescription(java.lang.String description, int experimentIndex)
setExperimentDescription
インタフェース内 ome.xml.meta.MetadataStore
public void setExperimentExperimenterRef(java.lang.String experimenter, int experimentIndex)
setExperimentExperimenterRef
インタフェース内 ome.xml.meta.MetadataStore
public void setExperimentType(ome.xml.model.enums.ExperimentType type, int experimentIndex)
setExperimentType
インタフェース内 ome.xml.meta.MetadataStore
public void setExperimenterID(java.lang.String id, int experimenterIndex)
setExperimenterID
インタフェース内 ome.xml.meta.MetadataStore
public void setExperimenterAnnotationRef(java.lang.String annotation, int experimenterIndex, int annotationRefIndex)
setExperimenterAnnotationRef
インタフェース内 ome.xml.meta.MetadataStore
public void setExperimenterDisplayName(java.lang.String displayName, int experimenterIndex)
public void setExperimenterEmail(java.lang.String email, int experimenterIndex)
setExperimenterEmail
インタフェース内 ome.xml.meta.MetadataStore
public void setExperimenterFirstName(java.lang.String firstName, int experimenterIndex)
setExperimenterFirstName
インタフェース内 ome.xml.meta.MetadataStore
public void setExperimenterGroupRef(java.lang.String group, int experimenterIndex, int groupRefIndex)
public void setExperimenterInstitution(java.lang.String institution, int experimenterIndex)
setExperimenterInstitution
インタフェース内 ome.xml.meta.MetadataStore
public void setExperimenterLastName(java.lang.String lastName, int experimenterIndex)
setExperimenterLastName
インタフェース内 ome.xml.meta.MetadataStore
public void setExperimenterMiddleName(java.lang.String middleName, int experimenterIndex)
setExperimenterMiddleName
インタフェース内 ome.xml.meta.MetadataStore
public void setExperimenterUserName(java.lang.String userName, int experimenterIndex)
setExperimenterUserName
インタフェース内 ome.xml.meta.MetadataStore
public omero.model.Filament getFilament(int instrumentIndex, int lightSourceIndex)
public void setFilamentID(java.lang.String id, int instrumentIndex, int lightSourceIndex)
setFilamentID
インタフェース内 ome.xml.meta.MetadataStore
public void setFilamentLotNumber(java.lang.String lotNumber, int instrumentIndex, int lightSourceIndex)
setFilamentLotNumber
インタフェース内 ome.xml.meta.MetadataStore
public void setFilamentManufacturer(java.lang.String manufacturer, int instrumentIndex, int lightSourceIndex)
setFilamentManufacturer
インタフェース内 ome.xml.meta.MetadataStore
public void setFilamentModel(java.lang.String model, int instrumentIndex, int lightSourceIndex)
setFilamentModel
インタフェース内 ome.xml.meta.MetadataStore
public void setFilamentPower(java.lang.Double power, int instrumentIndex, int lightSourceIndex)
setFilamentPower
インタフェース内 ome.xml.meta.MetadataStore
public void setFilamentSerialNumber(java.lang.String serialNumber, int instrumentIndex, int lightSourceIndex)
setFilamentSerialNumber
インタフェース内 ome.xml.meta.MetadataStore
public void setFilamentType(ome.xml.model.enums.FilamentType type, int instrumentIndex, int lightSourceIndex)
setFilamentType
インタフェース内 ome.xml.meta.MetadataStore
public void setFileAnnotationID(java.lang.String id, int fileAnnotationIndex)
setFileAnnotationID
インタフェース内 ome.xml.meta.MetadataStore
public void setFileAnnotationNamespace(java.lang.String namespace, int fileAnnotationIndex)
setFileAnnotationNamespace
インタフェース内 ome.xml.meta.MetadataStore
public void setFileAnnotationBinaryFileFileName(java.lang.String fileName, int fileAnnotationIndex)
public void setFileAnnotationBinaryFileMIMEType(java.lang.String mimetype, int fileAnnotationIndex)
public void setFileAnnotationBinaryFileSize(ome.xml.model.primitives.NonNegativeLong size, int fileAnnotationIndex)
public void setFilterID(java.lang.String id, int instrumentIndex, int filterIndex)
setFilterID
インタフェース内 ome.xml.meta.MetadataStore
public void setFilterFilterWheel(java.lang.String filterWheel, int instrumentIndex, int filterIndex)
setFilterFilterWheel
インタフェース内 ome.xml.meta.MetadataStore
public void setFilterLotNumber(java.lang.String lotNumber, int instrumentIndex, int filterIndex)
setFilterLotNumber
インタフェース内 ome.xml.meta.MetadataStore
public void setFilterManufacturer(java.lang.String manufacturer, int instrumentIndex, int filterIndex)
setFilterManufacturer
インタフェース内 ome.xml.meta.MetadataStore
public void setFilterModel(java.lang.String model, int instrumentIndex, int filterIndex)
setFilterModel
インタフェース内 ome.xml.meta.MetadataStore
public void setFilterSerialNumber(java.lang.String serialNumber, int instrumentIndex, int filterIndex)
setFilterSerialNumber
インタフェース内 ome.xml.meta.MetadataStore
public void setFilterType(ome.xml.model.enums.FilterType type, int instrumentIndex, int filterIndex)
setFilterType
インタフェース内 ome.xml.meta.MetadataStore
public omero.model.FilterSet getFilterSet(int instrumentIndex, int filterSetIndex)
public void setFilterSetID(java.lang.String id, int instrumentIndex, int filterSetIndex)
setFilterSetID
インタフェース内 ome.xml.meta.MetadataStore
public void setFilterSetDichroicRef(java.lang.String dichroic, int instrumentIndex, int filterSetIndex)
setFilterSetDichroicRef
インタフェース内 ome.xml.meta.MetadataStore
public void setFilterSetEmissionFilterRef(java.lang.String emissionFilter, int instrumentIndex, int filterSetIndex, int emissionFilterRefIndex)
setFilterSetEmissionFilterRef
インタフェース内 ome.xml.meta.MetadataStore
public void setFilterSetExcitationFilterRef(java.lang.String excitationFilter, int instrumentIndex, int filterSetIndex, int excitationFilterRefIndex)
setFilterSetExcitationFilterRef
インタフェース内 ome.xml.meta.MetadataStore
public void setFilterSetLotNumber(java.lang.String lotNumber, int instrumentIndex, int filterSetIndex)
setFilterSetLotNumber
インタフェース内 ome.xml.meta.MetadataStore
public void setFilterSetManufacturer(java.lang.String manufacturer, int instrumentIndex, int filterSetIndex)
setFilterSetManufacturer
インタフェース内 ome.xml.meta.MetadataStore
public void setFilterSetModel(java.lang.String model, int instrumentIndex, int filterSetIndex)
setFilterSetModel
インタフェース内 ome.xml.meta.MetadataStore
public void setFilterSetSerialNumber(java.lang.String serialNumber, int instrumentIndex, int filterSetIndex)
setFilterSetSerialNumber
インタフェース内 ome.xml.meta.MetadataStore
public void setExperimenterGroupID(java.lang.String id, int groupIndex)
setExperimenterGroupID
インタフェース内 ome.xml.meta.MetadataStore
public void setExperimenterGroupDescription(java.lang.String description, int groupIndex)
setExperimenterGroupDescription
インタフェース内 ome.xml.meta.MetadataStore
public void setExperimenterGroupLeader(java.lang.String leader, int groupIndex, int leaderIndex)
setExperimenterGroupLeader
インタフェース内 ome.xml.meta.MetadataStore
public void setExperimenterGroupName(java.lang.String name, int groupIndex)
setExperimenterGroupName
インタフェース内 ome.xml.meta.MetadataStore
public void setImageID(java.lang.String id, int imageIndex)
setImageID
インタフェース内 ome.xml.meta.MetadataStore
public void setImageAcquisitionDate(ome.xml.model.primitives.Timestamp acquiredDate, int imageIndex)
setImageAcquisitionDate
インタフェース内 ome.xml.meta.MetadataStore
public void setImageAnnotationRef(java.lang.String annotation, int imageIndex, int annotationRefIndex)
setImageAnnotationRef
インタフェース内 ome.xml.meta.MetadataStore
public void setImageDescription(java.lang.String description, int imageIndex)
setImageDescription
インタフェース内 ome.xml.meta.MetadataStore
public void setImageExperimentRef(java.lang.String experiment, int imageIndex)
setImageExperimentRef
インタフェース内 ome.xml.meta.MetadataStore
public void setImageExperimenterRef(java.lang.String experimenter, int imageIndex)
setImageExperimenterRef
インタフェース内 ome.xml.meta.MetadataStore
public void setImageExperimenterGroupRef(java.lang.String group, int imageIndex)
setImageExperimenterGroupRef
インタフェース内 ome.xml.meta.MetadataStore
public void setImageInstrumentRef(java.lang.String instrument, int imageIndex)
setImageInstrumentRef
インタフェース内 ome.xml.meta.MetadataStore
public void setImageMicrobeamManipulationRef(java.lang.String microbeamManipulation, int imageIndex, int microbeamManipulationRefIndex)
setImageMicrobeamManipulationRef
インタフェース内 ome.xml.meta.MetadataStore
public void setImageName(java.lang.String name, int imageIndex)
setImageName
インタフェース内 ome.xml.meta.MetadataStore
public void setImageROIRef(java.lang.String roi, int imageIndex, int ROIRefIndex)
setImageROIRef
インタフェース内 ome.xml.meta.MetadataStore
public omero.model.ObjectiveSettings getObjectiveSettings(int imageIndex)
public void setObjectiveSettingsID(java.lang.String id, int imageIndex)
setObjectiveSettingsID
インタフェース内 ome.xml.meta.MetadataStore
public void setObjectiveSettingsCorrectionCollar(java.lang.Double correctionCollar, int imageIndex)
setObjectiveSettingsCorrectionCollar
インタフェース内 ome.xml.meta.MetadataStore
public void setObjectiveSettingsMedium(ome.xml.model.enums.Medium medium, int imageIndex)
setObjectiveSettingsMedium
インタフェース内 ome.xml.meta.MetadataStore
public void setObjectiveSettingsRefractiveIndex(java.lang.Double refractiveIndex, int imageIndex)
setObjectiveSettingsRefractiveIndex
インタフェース内 ome.xml.meta.MetadataStore
public omero.model.ImagingEnvironment getImagingEnvironment(int imageIndex)
public void setImagingEnvironmentAirPressure(java.lang.Double airPressure, int imageIndex)
setImagingEnvironmentAirPressure
インタフェース内 ome.xml.meta.MetadataStore
public void setImagingEnvironmentCO2Percent(ome.xml.model.primitives.PercentFraction co2percent, int imageIndex)
setImagingEnvironmentCO2Percent
インタフェース内 ome.xml.meta.MetadataStore
public void setImagingEnvironmentHumidity(ome.xml.model.primitives.PercentFraction humidity, int imageIndex)
setImagingEnvironmentHumidity
インタフェース内 ome.xml.meta.MetadataStore
public void setImagingEnvironmentTemperature(java.lang.Double temperature, int imageIndex)
setImagingEnvironmentTemperature
インタフェース内 ome.xml.meta.MetadataStore
public void setInstrumentID(java.lang.String id, int instrumentIndex)
setInstrumentID
インタフェース内 ome.xml.meta.MetadataStore
public omero.model.Laser getLaser(int instrumentIndex, int lightSourceIndex)
public void setLaserID(java.lang.String id, int instrumentIndex, int lightSourceIndex)
setLaserID
インタフェース内 ome.xml.meta.MetadataStore
public void setLaserFrequencyMultiplication(ome.xml.model.primitives.PositiveInteger frequencyMultiplication, int instrumentIndex, int lightSourceIndex)
setLaserFrequencyMultiplication
インタフェース内 ome.xml.meta.MetadataStore
public void setLaserLaserMedium(ome.xml.model.enums.LaserMedium laserMedium, int instrumentIndex, int lightSourceIndex)
setLaserLaserMedium
インタフェース内 ome.xml.meta.MetadataStore
public void setLaserLotNumber(java.lang.String lotNumber, int instrumentIndex, int lightSourceIndex)
setLaserLotNumber
インタフェース内 ome.xml.meta.MetadataStore
public void setLaserManufacturer(java.lang.String manufacturer, int instrumentIndex, int lightSourceIndex)
setLaserManufacturer
インタフェース内 ome.xml.meta.MetadataStore
public void setLaserModel(java.lang.String model, int instrumentIndex, int lightSourceIndex)
setLaserModel
インタフェース内 ome.xml.meta.MetadataStore
public void setLaserPockelCell(java.lang.Boolean pockelCell, int instrumentIndex, int lightSourceIndex)
setLaserPockelCell
インタフェース内 ome.xml.meta.MetadataStore
public void setLaserPower(java.lang.Double power, int instrumentIndex, int lightSourceIndex)
setLaserPower
インタフェース内 ome.xml.meta.MetadataStore
public void setLaserPulse(ome.xml.model.enums.Pulse pulse, int instrumentIndex, int lightSourceIndex)
setLaserPulse
インタフェース内 ome.xml.meta.MetadataStore
public void setLaserPump(java.lang.String pump, int instrumentIndex, int lightSourceIndex)
setLaserPump
インタフェース内 ome.xml.meta.MetadataStore
public void setLaserRepetitionRate(java.lang.Double repetitionRate, int instrumentIndex, int lightSourceIndex)
setLaserRepetitionRate
インタフェース内 ome.xml.meta.MetadataStore
public void setLaserSerialNumber(java.lang.String serialNumber, int instrumentIndex, int lightSourceIndex)
setLaserSerialNumber
インタフェース内 ome.xml.meta.MetadataStore
public void setLaserTuneable(java.lang.Boolean tuneable, int instrumentIndex, int lightSourceIndex)
setLaserTuneable
インタフェース内 ome.xml.meta.MetadataStore
public void setLaserType(ome.xml.model.enums.LaserType type, int instrumentIndex, int lightSourceIndex)
setLaserType
インタフェース内 ome.xml.meta.MetadataStore
public void setLaserWavelength(ome.xml.model.primitives.PositiveInteger wavelength, int instrumentIndex, int lightSourceIndex)
setLaserWavelength
インタフェース内 ome.xml.meta.MetadataStore
public omero.model.LightEmittingDiode getLightEmittingDiode(int instrumentIndex, int lightSourceIndex)
public void setLightEmittingDiodeID(java.lang.String id, int instrumentIndex, int lightSourceIndex)
setLightEmittingDiodeID
インタフェース内 ome.xml.meta.MetadataStore
public void setLightEmittingDiodeLotNumber(java.lang.String lotNumber, int instrumentIndex, int lightSourceIndex)
setLightEmittingDiodeLotNumber
インタフェース内 ome.xml.meta.MetadataStore
public void setLightEmittingDiodeManufacturer(java.lang.String manufacturer, int instrumentIndex, int lightSourceIndex)
setLightEmittingDiodeManufacturer
インタフェース内 ome.xml.meta.MetadataStore
public void setLightEmittingDiodeModel(java.lang.String model, int instrumentIndex, int lightSourceIndex)
setLightEmittingDiodeModel
インタフェース内 ome.xml.meta.MetadataStore
public void setLightEmittingDiodePower(java.lang.Double power, int instrumentIndex, int lightSourceIndex)
setLightEmittingDiodePower
インタフェース内 ome.xml.meta.MetadataStore
public void setLightEmittingDiodeSerialNumber(java.lang.String serialNumber, int instrumentIndex, int lightSourceIndex)
setLightEmittingDiodeSerialNumber
インタフェース内 ome.xml.meta.MetadataStore
public void setLightPathDichroicRef(java.lang.String dichroic, int imageIndex, int channelIndex)
setLightPathDichroicRef
インタフェース内 ome.xml.meta.MetadataStore
public void setLightPathEmissionFilterRef(java.lang.String emissionFilter, int imageIndex, int channelIndex, int emissionFilterRefIndex)
setLightPathEmissionFilterRef
インタフェース内 ome.xml.meta.MetadataStore
public void setLightPathExcitationFilterRef(java.lang.String excitationFilter, int imageIndex, int channelIndex, int excitationFilterRefIndex)
setLightPathExcitationFilterRef
インタフェース内 ome.xml.meta.MetadataStore
public omero.model.Line getLine(int ROIIndex, int shapeIndex)
public void setLineID(java.lang.String id, int ROIIndex, int shapeIndex)
setLineID
インタフェース内 ome.xml.meta.MetadataStore
public void setLineText(java.lang.String text, int ROIIndex, int shapeIndex)
setLineText
インタフェース内 ome.xml.meta.MetadataStore
public void setLineFillColor(ome.xml.model.primitives.Color fill, int ROIIndex, int shapeIndex)
setLineFillColor
インタフェース内 ome.xml.meta.MetadataStore
public void setLineFontSize(ome.xml.model.primitives.NonNegativeInteger fontSize, int ROIIndex, int shapeIndex)
setLineFontSize
インタフェース内 ome.xml.meta.MetadataStore
public void setLineStrokeColor(ome.xml.model.primitives.Color stroke, int ROIIndex, int shapeIndex)
setLineStrokeColor
インタフェース内 ome.xml.meta.MetadataStore
public void setLineStrokeDashArray(java.lang.String strokeDashArray, int ROIIndex, int shapeIndex)
setLineStrokeDashArray
インタフェース内 ome.xml.meta.MetadataStore
public void setLineStrokeWidth(java.lang.Double strokeWidth, int ROIIndex, int shapeIndex)
setLineStrokeWidth
インタフェース内 ome.xml.meta.MetadataStore
public void setLineTheC(ome.xml.model.primitives.NonNegativeInteger theC, int ROIIndex, int shapeIndex)
setLineTheC
インタフェース内 ome.xml.meta.MetadataStore
public void setLineTheT(ome.xml.model.primitives.NonNegativeInteger theT, int ROIIndex, int shapeIndex)
setLineTheT
インタフェース内 ome.xml.meta.MetadataStore
public void setLineTheZ(ome.xml.model.primitives.NonNegativeInteger theZ, int ROIIndex, int shapeIndex)
setLineTheZ
インタフェース内 ome.xml.meta.MetadataStore
public void setLineTransform(ome.xml.model.AffineTransform transform, int ROIIndex, int shapeIndex)
setLineTransform
インタフェース内 ome.xml.meta.MetadataStore
public void setLineX1(java.lang.Double x1, int ROIIndex, int shapeIndex)
setLineX1
インタフェース内 ome.xml.meta.MetadataStore
public void setLineX2(java.lang.Double x2, int ROIIndex, int shapeIndex)
setLineX2
インタフェース内 ome.xml.meta.MetadataStore
public void setLineY1(java.lang.Double y1, int ROIIndex, int shapeIndex)
setLineY1
インタフェース内 ome.xml.meta.MetadataStore
public void setLineY2(java.lang.Double y2, int ROIIndex, int shapeIndex)
setLineY2
インタフェース内 ome.xml.meta.MetadataStore
public omero.model.ListAnnotation getListAnnotation(int listAnnotationIndex)
public void setListAnnotationID(java.lang.String id, int listAnnotationIndex)
setListAnnotationID
インタフェース内 ome.xml.meta.MetadataStore
public void setListAnnotationAnnotationRef(java.lang.String annotation, int listAnnotationIndex, int annotationRefIndex)
setListAnnotationAnnotationRef
インタフェース内 ome.xml.meta.MetadataStore
public void setListAnnotationNamespace(java.lang.String namespace, int listAnnotationIndex)
setListAnnotationNamespace
インタフェース内 ome.xml.meta.MetadataStore
public omero.model.LongAnnotation getLongAnnotation(int longAnnotationIndex)
public void setLongAnnotationID(java.lang.String id, int longAnnotationIndex)
setLongAnnotationID
インタフェース内 ome.xml.meta.MetadataStore
public void setLongAnnotationNamespace(java.lang.String namespace, int longAnnotationIndex)
setLongAnnotationNamespace
インタフェース内 ome.xml.meta.MetadataStore
public void setLongAnnotationValue(java.lang.Long value, int longAnnotationIndex)
setLongAnnotationValue
インタフェース内 ome.xml.meta.MetadataStore
public omero.model.Mask getMask(int ROIIndex, int shapeIndex)
public void setMaskBinData(byte[] binData, int roiIndex, int shapeIndex)
setMaskBinData
インタフェース内 ome.xml.meta.MetadataStore
public void setMaskText(java.lang.String description, int ROIIndex, int shapeIndex)
setMaskText
インタフェース内 ome.xml.meta.MetadataStore
public void setMaskFillColor(ome.xml.model.primitives.Color fill, int ROIIndex, int shapeIndex)
setMaskFillColor
インタフェース内 ome.xml.meta.MetadataStore
public void setMaskFontSize(ome.xml.model.primitives.NonNegativeInteger fontSize, int ROIIndex, int shapeIndex)
setMaskFontSize
インタフェース内 ome.xml.meta.MetadataStore
public void setMaskID(java.lang.String id, int ROIIndex, int shapeIndex)
setMaskID
インタフェース内 ome.xml.meta.MetadataStore
public void setMaskStrokeColor(ome.xml.model.primitives.Color stroke, int ROIIndex, int shapeIndex)
setMaskStrokeColor
インタフェース内 ome.xml.meta.MetadataStore
public void setMaskStrokeDashArray(java.lang.String strokeDashArray, int ROIIndex, int shapeIndex)
setMaskStrokeDashArray
インタフェース内 ome.xml.meta.MetadataStore
public void setMaskStrokeWidth(java.lang.Double strokeWidth, int ROIIndex, int shapeIndex)
setMaskStrokeWidth
インタフェース内 ome.xml.meta.MetadataStore
public void setMaskTheC(ome.xml.model.primitives.NonNegativeInteger theC, int ROIIndex, int shapeIndex)
setMaskTheC
インタフェース内 ome.xml.meta.MetadataStore
public void setMaskTheT(ome.xml.model.primitives.NonNegativeInteger theT, int ROIIndex, int shapeIndex)
setMaskTheT
インタフェース内 ome.xml.meta.MetadataStore
public void setMaskTheZ(ome.xml.model.primitives.NonNegativeInteger theZ, int ROIIndex, int shapeIndex)
setMaskTheZ
インタフェース内 ome.xml.meta.MetadataStore
public void setMaskTransform(ome.xml.model.AffineTransform transform, int ROIIndex, int shapeIndex)
setMaskTransform
インタフェース内 ome.xml.meta.MetadataStore
public void setMaskX(java.lang.Double x, int ROIIndex, int shapeIndex)
setMaskX
インタフェース内 ome.xml.meta.MetadataStore
public void setMaskY(java.lang.Double y, int ROIIndex, int shapeIndex)
setMaskY
インタフェース内 ome.xml.meta.MetadataStore
public void setMaskHeight(java.lang.Double height, int ROIIndex, int shapeIndex)
setMaskHeight
インタフェース内 ome.xml.meta.MetadataStore
public void setMaskWidth(java.lang.Double width, int ROIIndex, int shapeIndex)
setMaskWidth
インタフェース内 ome.xml.meta.MetadataStore
public omero.model.MicrobeamManipulation getMicrobeamManipulation(int experimentIndex, int microbeamManipulationIndex)
public void setMicrobeamManipulationID(java.lang.String id, int experimentIndex, int microbeamManipulationIndex)
setMicrobeamManipulationID
インタフェース内 ome.xml.meta.MetadataStore
public void setMicrobeamManipulationDescription(java.lang.String description, int experimentIndex, int microbeamManipulationIndex)
setMicrobeamManipulationDescription
インタフェース内 ome.xml.meta.MetadataStore
public void setMicrobeamManipulationExperimenterRef(java.lang.String experimenter, int experimentIndex, int microbeamManipulationIndex)
setMicrobeamManipulationExperimenterRef
インタフェース内 ome.xml.meta.MetadataStore
public void setMicrobeamManipulationROIRef(java.lang.String roi, int experimentIndex, int microbeamManipulationIndex, int ROIRefIndex)
setMicrobeamManipulationROIRef
インタフェース内 ome.xml.meta.MetadataStore
public void setMicrobeamManipulationType(ome.xml.model.enums.MicrobeamManipulationType type, int experimentIndex, int microbeamManipulationIndex)
setMicrobeamManipulationType
インタフェース内 ome.xml.meta.MetadataStore
public omero.model.LightSettings getMicrobeamManipulationLightSourceSettings(int experimentIndex, int microbeamManipulationIndex, int lightSourceSettingsIndex)
public void setMicrobeamManipulationLightSourceSettingsID(java.lang.String id, int experimentIndex, int microbeamManipulationIndex, int lightSourceSettingsIndex)
setMicrobeamManipulationLightSourceSettingsID
インタフェース内 ome.xml.meta.MetadataStore
public void setMicrobeamManipulationLightSourceSettingsAttenuation(ome.xml.model.primitives.PercentFraction attenuation, int experimentIndex, int microbeamManipulationIndex, int lightSourceSettingsIndex)
setMicrobeamManipulationLightSourceSettingsAttenuation
インタフェース内 ome.xml.meta.MetadataStore
public void setMicrobeamManipulationLightSourceSettingsWavelength(ome.xml.model.primitives.PositiveInteger wavelength, int experimentIndex, int microbeamManipulationIndex, int lightSourceSettingsIndex)
setMicrobeamManipulationLightSourceSettingsWavelength
インタフェース内 ome.xml.meta.MetadataStore
public void setMicroscopeLotNumber(java.lang.String lotNumber, int instrumentIndex)
setMicroscopeLotNumber
インタフェース内 ome.xml.meta.MetadataStore
public void setMicroscopeManufacturer(java.lang.String manufacturer, int instrumentIndex)
setMicroscopeManufacturer
インタフェース内 ome.xml.meta.MetadataStore
public void setMicroscopeModel(java.lang.String model, int instrumentIndex)
setMicroscopeModel
インタフェース内 ome.xml.meta.MetadataStore
public void setMicroscopeSerialNumber(java.lang.String serialNumber, int instrumentIndex)
setMicroscopeSerialNumber
インタフェース内 ome.xml.meta.MetadataStore
public void setMicroscopeType(ome.xml.model.enums.MicroscopeType type, int instrumentIndex)
setMicroscopeType
インタフェース内 ome.xml.meta.MetadataStore
public omero.model.Objective getObjective(int instrumentIndex, int objectiveIndex)
public void setObjectiveCalibratedMagnification(java.lang.Double calibratedMagnification, int instrumentIndex, int objectiveIndex)
setObjectiveCalibratedMagnification
インタフェース内 ome.xml.meta.MetadataStore
public void setObjectiveCorrection(ome.xml.model.enums.Correction correction, int instrumentIndex, int objectiveIndex)
setObjectiveCorrection
インタフェース内 ome.xml.meta.MetadataStore
public void setObjectiveID(java.lang.String id, int instrumentIndex, int objectiveIndex)
setObjectiveID
インタフェース内 ome.xml.meta.MetadataStore
public void setObjectiveImmersion(ome.xml.model.enums.Immersion immersion, int instrumentIndex, int objectiveIndex)
setObjectiveImmersion
インタフェース内 ome.xml.meta.MetadataStore
public void setObjectiveIris(java.lang.Boolean iris, int instrumentIndex, int objectiveIndex)
setObjectiveIris
インタフェース内 ome.xml.meta.MetadataStore
public void setObjectiveLensNA(java.lang.Double lensNA, int instrumentIndex, int objectiveIndex)
setObjectiveLensNA
インタフェース内 ome.xml.meta.MetadataStore
public void setObjectiveLotNumber(java.lang.String lotNumber, int instrumentIndex, int objectiveIndex)
setObjectiveLotNumber
インタフェース内 ome.xml.meta.MetadataStore
public void setObjectiveManufacturer(java.lang.String manufacturer, int instrumentIndex, int objectiveIndex)
setObjectiveManufacturer
インタフェース内 ome.xml.meta.MetadataStore
public void setObjectiveModel(java.lang.String model, int instrumentIndex, int objectiveIndex)
setObjectiveModel
インタフェース内 ome.xml.meta.MetadataStore
public void setObjectiveNominalMagnification(java.lang.Double nominalMagnification, int instrumentIndex, int objectiveIndex)
setObjectiveNominalMagnification
インタフェース内 ome.xml.meta.MetadataStore
public void setObjectiveSerialNumber(java.lang.String serialNumber, int instrumentIndex, int objectiveIndex)
setObjectiveSerialNumber
インタフェース内 ome.xml.meta.MetadataStore
public void setObjectiveWorkingDistance(java.lang.Double workingDistance, int instrumentIndex, int objectiveIndex)
setObjectiveWorkingDistance
インタフェース内 ome.xml.meta.MetadataStore
public void setPixelsID(java.lang.String id, int imageIndex)
setPixelsID
インタフェース内 ome.xml.meta.MetadataStore
public void setPixelsAnnotationRef(java.lang.String annotation, int imageIndex, int annotationRefIndex)
setPixelsAnnotationRef
インタフェース内 ome.xml.meta.MetadataStore
public void setPixelsBigEndian(java.lang.Boolean value, int index)
setPixelsBigEndian
インタフェース内 ome.xml.meta.MetadataStore
public void setPixelsBinDataBigEndian(java.lang.Boolean bigEndian, int imageIndex, int binDataIndex)
setPixelsBinDataBigEndian
インタフェース内 ome.xml.meta.MetadataStore
public void setPixelsDimensionOrder(ome.xml.model.enums.DimensionOrder dimensionOrder, int imageIndex)
setPixelsDimensionOrder
インタフェース内 ome.xml.meta.MetadataStore
public void setPixelsInterleaved(java.lang.Boolean value, int index)
setPixelsInterleaved
インタフェース内 ome.xml.meta.MetadataStore
public void setPixelsPhysicalSizeX(ome.xml.model.primitives.PositiveFloat physicalSizeX, int imageIndex)
setPixelsPhysicalSizeX
インタフェース内 ome.xml.meta.MetadataStore
public void setPixelsPhysicalSizeY(ome.xml.model.primitives.PositiveFloat physicalSizeY, int imageIndex)
setPixelsPhysicalSizeY
インタフェース内 ome.xml.meta.MetadataStore
public void setPixelsPhysicalSizeZ(ome.xml.model.primitives.PositiveFloat physicalSizeZ, int imageIndex)
setPixelsPhysicalSizeZ
インタフェース内 ome.xml.meta.MetadataStore
public void setPixelsSignificantBits(ome.xml.model.primitives.PositiveInteger value, int imageIndex)
setPixelsSignificantBits
インタフェース内 ome.xml.meta.MetadataStore
public void setPixelsSizeC(ome.xml.model.primitives.PositiveInteger sizeC, int imageIndex)
setPixelsSizeC
インタフェース内 ome.xml.meta.MetadataStore
public void setPixelsSizeT(ome.xml.model.primitives.PositiveInteger sizeT, int imageIndex)
setPixelsSizeT
インタフェース内 ome.xml.meta.MetadataStore
public void setPixelsSizeX(ome.xml.model.primitives.PositiveInteger sizeX, int imageIndex)
setPixelsSizeX
インタフェース内 ome.xml.meta.MetadataStore
public void setPixelsSizeY(ome.xml.model.primitives.PositiveInteger sizeY, int imageIndex)
setPixelsSizeY
インタフェース内 ome.xml.meta.MetadataStore
public void setPixelsSizeZ(ome.xml.model.primitives.PositiveInteger sizeZ, int imageIndex)
setPixelsSizeZ
インタフェース内 ome.xml.meta.MetadataStore
public void setPixelsTimeIncrement(java.lang.Double timeIncrement, int imageIndex)
setPixelsTimeIncrement
インタフェース内 ome.xml.meta.MetadataStore
public void setPixelsType(ome.xml.model.enums.PixelType type, int imageIndex)
setPixelsType
インタフェース内 ome.xml.meta.MetadataStore
public void setPlaneAnnotationRef(java.lang.String annotation, int imageIndex, int planeIndex, int annotationRefIndex)
setPlaneAnnotationRef
インタフェース内 ome.xml.meta.MetadataStore
public void setPlaneDeltaT(java.lang.Double deltaT, int imageIndex, int planeIndex)
setPlaneDeltaT
インタフェース内 ome.xml.meta.MetadataStore
public void setPlaneExposureTime(java.lang.Double exposureTime, int imageIndex, int planeIndex)
setPlaneExposureTime
インタフェース内 ome.xml.meta.MetadataStore
public void setPlaneHashSHA1(java.lang.String hashSHA1, int imageIndex, int planeIndex)
setPlaneHashSHA1
インタフェース内 ome.xml.meta.MetadataStore
public void setPlanePositionX(java.lang.Double positionX, int imageIndex, int planeIndex)
setPlanePositionX
インタフェース内 ome.xml.meta.MetadataStore
public void setPlanePositionY(java.lang.Double positionY, int imageIndex, int planeIndex)
setPlanePositionY
インタフェース内 ome.xml.meta.MetadataStore
public void setPlanePositionZ(java.lang.Double positionZ, int imageIndex, int planeIndex)
setPlanePositionZ
インタフェース内 ome.xml.meta.MetadataStore
public void setPlaneTheC(ome.xml.model.primitives.NonNegativeInteger theC, int imageIndex, int planeIndex)
setPlaneTheC
インタフェース内 ome.xml.meta.MetadataStore
public void setPlaneTheT(ome.xml.model.primitives.NonNegativeInteger theT, int imageIndex, int planeIndex)
setPlaneTheT
インタフェース内 ome.xml.meta.MetadataStore
public void setPlaneTheZ(ome.xml.model.primitives.NonNegativeInteger theZ, int imageIndex, int planeIndex)
setPlaneTheZ
インタフェース内 ome.xml.meta.MetadataStore
public void setPlateAcquisitionAnnotationRef(java.lang.String annotation, int plateIndex, int plateAcquisitionIndex, int annotationRefIndex)
setPlateAcquisitionAnnotationRef
インタフェース内 ome.xml.meta.MetadataStore
public void setPlateAcquisitionDescription(java.lang.String description, int plateIndex, int plateAcquisitionIndex)
setPlateAcquisitionDescription
インタフェース内 ome.xml.meta.MetadataStore
public void setPlateAcquisitionEndTime(ome.xml.model.primitives.Timestamp endTime, int plateIndex, int plateAcquisitionIndex)
setPlateAcquisitionEndTime
インタフェース内 ome.xml.meta.MetadataStore
public void setPlateAcquisitionID(java.lang.String id, int plateIndex, int plateAcquisitionIndex)
setPlateAcquisitionID
インタフェース内 ome.xml.meta.MetadataStore
public void setPlateAcquisitionMaximumFieldCount(ome.xml.model.primitives.PositiveInteger maximumFieldCount, int plateIndex, int plateAcquisitionIndex)
setPlateAcquisitionMaximumFieldCount
インタフェース内 ome.xml.meta.MetadataStore
public void setPlateAcquisitionName(java.lang.String name, int plateIndex, int plateAcquisitionIndex)
setPlateAcquisitionName
インタフェース内 ome.xml.meta.MetadataStore
public void setPlateAcquisitionStartTime(ome.xml.model.primitives.Timestamp startTime, int plateIndex, int plateAcquisitionIndex)
setPlateAcquisitionStartTime
インタフェース内 ome.xml.meta.MetadataStore
public void setPlateAcquisitionWellSampleRef(java.lang.String wellSample, int plateIndex, int plateAcquisitionIndex, int wellSampleRefIndex)
setPlateAcquisitionWellSampleRef
インタフェース内 ome.xml.meta.MetadataStore
public void setPlateAnnotationRef(java.lang.String annotation, int plateIndex, int annotationRefIndex)
setPlateAnnotationRef
インタフェース内 ome.xml.meta.MetadataStore
public void setPlateColumnNamingConvention(ome.xml.model.enums.NamingConvention columnNamingConvention, int plateIndex)
setPlateColumnNamingConvention
インタフェース内 ome.xml.meta.MetadataStore
public void setPlateColumns(ome.xml.model.primitives.PositiveInteger columns, int plateIndex)
setPlateColumns
インタフェース内 ome.xml.meta.MetadataStore
public void setPlateDescription(java.lang.String description, int plateIndex)
setPlateDescription
インタフェース内 ome.xml.meta.MetadataStore
public void setPlateExternalIdentifier(java.lang.String externalIdentifier, int plateIndex)
setPlateExternalIdentifier
インタフェース内 ome.xml.meta.MetadataStore
public void setPlateID(java.lang.String id, int plateIndex)
setPlateID
インタフェース内 ome.xml.meta.MetadataStore
public void setPlateName(java.lang.String name, int plateIndex)
setPlateName
インタフェース内 ome.xml.meta.MetadataStore
public void setPlateRowNamingConvention(ome.xml.model.enums.NamingConvention rowNamingConvention, int plateIndex)
setPlateRowNamingConvention
インタフェース内 ome.xml.meta.MetadataStore
public void setPlateRows(ome.xml.model.primitives.PositiveInteger rows, int plateIndex)
setPlateRows
インタフェース内 ome.xml.meta.MetadataStore
public void setPlateScreenRef(java.lang.String screen, int plateIndex, int screenRefIndex)
public void setPlateStatus(java.lang.String status, int plateIndex)
setPlateStatus
インタフェース内 ome.xml.meta.MetadataStore
public void setPlateWellOriginX(java.lang.Double wellOriginX, int plateIndex)
setPlateWellOriginX
インタフェース内 ome.xml.meta.MetadataStore
public void setPlateWellOriginY(java.lang.Double wellOriginY, int plateIndex)
setPlateWellOriginY
インタフェース内 ome.xml.meta.MetadataStore
public void setPointText(java.lang.String text, int ROIIndex, int shapeIndex)
setPointText
インタフェース内 ome.xml.meta.MetadataStore
public void setPointFillColor(ome.xml.model.primitives.Color fill, int ROIIndex, int shapeIndex)
setPointFillColor
インタフェース内 ome.xml.meta.MetadataStore
public void setPointFontSize(ome.xml.model.primitives.NonNegativeInteger fontSize, int ROIIndex, int shapeIndex)
setPointFontSize
インタフェース内 ome.xml.meta.MetadataStore
public void setPointID(java.lang.String id, int ROIIndex, int shapeIndex)
setPointID
インタフェース内 ome.xml.meta.MetadataStore
public void setPointStrokeColor(ome.xml.model.primitives.Color stroke, int ROIIndex, int shapeIndex)
setPointStrokeColor
インタフェース内 ome.xml.meta.MetadataStore
public void setPointStrokeDashArray(java.lang.String strokeDashArray, int ROIIndex, int shapeIndex)
setPointStrokeDashArray
インタフェース内 ome.xml.meta.MetadataStore
public void setPointStrokeWidth(java.lang.Double strokeWidth, int ROIIndex, int shapeIndex)
setPointStrokeWidth
インタフェース内 ome.xml.meta.MetadataStore
public void setPointTheC(ome.xml.model.primitives.NonNegativeInteger theC, int ROIIndex, int shapeIndex)
setPointTheC
インタフェース内 ome.xml.meta.MetadataStore
public void setPointTheT(ome.xml.model.primitives.NonNegativeInteger theT, int ROIIndex, int shapeIndex)
setPointTheT
インタフェース内 ome.xml.meta.MetadataStore
public void setPointTheZ(ome.xml.model.primitives.NonNegativeInteger theZ, int ROIIndex, int shapeIndex)
setPointTheZ
インタフェース内 ome.xml.meta.MetadataStore
public void setPointTransform(ome.xml.model.AffineTransform transform, int ROIIndex, int shapeIndex)
setPointTransform
インタフェース内 ome.xml.meta.MetadataStore
public void setPointX(java.lang.Double x, int ROIIndex, int shapeIndex)
setPointX
インタフェース内 ome.xml.meta.MetadataStore
public void setPointY(java.lang.Double y, int ROIIndex, int shapeIndex)
setPointY
インタフェース内 ome.xml.meta.MetadataStore
public void setPolylineID(java.lang.String id, int ROIIndex, int shapeIndex)
setPolylineID
インタフェース内 ome.xml.meta.MetadataStore
public void setPolylineText(java.lang.String text, int ROIIndex, int shapeIndex)
setPolylineText
インタフェース内 ome.xml.meta.MetadataStore
public void setPolylineFillColor(ome.xml.model.primitives.Color fill, int ROIIndex, int shapeIndex)
setPolylineFillColor
インタフェース内 ome.xml.meta.MetadataStore
public void setPolylineFontSize(ome.xml.model.primitives.NonNegativeInteger fontSize, int ROIIndex, int shapeIndex)
setPolylineFontSize
インタフェース内 ome.xml.meta.MetadataStore
public void setPolylinePoints(java.lang.String points, int ROIIndex, int shapeIndex)
setPolylinePoints
インタフェース内 ome.xml.meta.MetadataStore
public void setPolylineStrokeColor(ome.xml.model.primitives.Color stroke, int ROIIndex, int shapeIndex)
setPolylineStrokeColor
インタフェース内 ome.xml.meta.MetadataStore
public void setPolylineStrokeDashArray(java.lang.String strokeDashArray, int ROIIndex, int shapeIndex)
setPolylineStrokeDashArray
インタフェース内 ome.xml.meta.MetadataStore
public void setPolylineStrokeWidth(java.lang.Double strokeWidth, int ROIIndex, int shapeIndex)
setPolylineStrokeWidth
インタフェース内 ome.xml.meta.MetadataStore
public void setPolylineTheC(ome.xml.model.primitives.NonNegativeInteger theC, int ROIIndex, int shapeIndex)
setPolylineTheC
インタフェース内 ome.xml.meta.MetadataStore
public void setPolylineTheT(ome.xml.model.primitives.NonNegativeInteger theT, int ROIIndex, int shapeIndex)
setPolylineTheT
インタフェース内 ome.xml.meta.MetadataStore
public void setPolylineTheZ(ome.xml.model.primitives.NonNegativeInteger theZ, int ROIIndex, int shapeIndex)
setPolylineTheZ
インタフェース内 ome.xml.meta.MetadataStore
public void setPolylineTransform(ome.xml.model.AffineTransform transform, int ROIIndex, int shapeIndex)
setPolylineTransform
インタフェース内 ome.xml.meta.MetadataStore
public void setProjectID(java.lang.String id, int projectIndex)
setProjectID
インタフェース内 ome.xml.meta.MetadataStore
public void setProjectAnnotationRef(java.lang.String annotation, int projectIndex, int annotationRefIndex)
setProjectAnnotationRef
インタフェース内 ome.xml.meta.MetadataStore
public void setProjectDescription(java.lang.String description, int projectIndex)
setProjectDescription
インタフェース内 ome.xml.meta.MetadataStore
public void setProjectExperimenterRef(java.lang.String experimenter, int projectIndex)
setProjectExperimenterRef
インタフェース内 ome.xml.meta.MetadataStore
public void setProjectExperimenterGroupRef(java.lang.String group, int projectIndex)
setProjectExperimenterGroupRef
インタフェース内 ome.xml.meta.MetadataStore
public void setProjectName(java.lang.String name, int projectIndex)
setProjectName
インタフェース内 ome.xml.meta.MetadataStore
public void setROIID(java.lang.String id, int ROIIndex)
setROIID
インタフェース内 ome.xml.meta.MetadataStore
public void setROIAnnotationRef(java.lang.String annotation, int ROIIndex, int annotationRefIndex)
setROIAnnotationRef
インタフェース内 ome.xml.meta.MetadataStore
public void setROIDescription(java.lang.String description, int ROIIndex)
setROIDescription
インタフェース内 ome.xml.meta.MetadataStore
public void setROIName(java.lang.String name, int ROIIndex)
setROIName
インタフェース内 ome.xml.meta.MetadataStore
public void setROINamespace(java.lang.String namespace, int ROIIndex)
setROINamespace
インタフェース内 ome.xml.meta.MetadataStore
public void setReagentID(java.lang.String id, int screenIndex, int reagentIndex)
setReagentID
インタフェース内 ome.xml.meta.MetadataStore
public void setReagentAnnotationRef(java.lang.String annotation, int screenIndex, int reagentIndex, int annotationRefIndex)
setReagentAnnotationRef
インタフェース内 ome.xml.meta.MetadataStore
public void setReagentDescription(java.lang.String description, int screenIndex, int reagentIndex)
setReagentDescription
インタフェース内 ome.xml.meta.MetadataStore
public void setReagentName(java.lang.String name, int screenIndex, int reagentIndex)
setReagentName
インタフェース内 ome.xml.meta.MetadataStore
public void setReagentReagentIdentifier(java.lang.String reagentIdentifier, int screenIndex, int reagentIndex)
setReagentReagentIdentifier
インタフェース内 ome.xml.meta.MetadataStore
public void setRectangleID(java.lang.String id, int ROIIndex, int shapeIndex)
setRectangleID
インタフェース内 ome.xml.meta.MetadataStore
public void setRectangleText(java.lang.String description, int ROIIndex, int shapeIndex)
setRectangleText
インタフェース内 ome.xml.meta.MetadataStore
public void setRectangleFillColor(ome.xml.model.primitives.Color fill, int ROIIndex, int shapeIndex)
setRectangleFillColor
インタフェース内 ome.xml.meta.MetadataStore
public void setRectangleFontSize(ome.xml.model.primitives.NonNegativeInteger fontSize, int ROIIndex, int shapeIndex)
setRectangleFontSize
インタフェース内 ome.xml.meta.MetadataStore
public void setRectangleHeight(java.lang.Double height, int ROIIndex, int shapeIndex)
setRectangleHeight
インタフェース内 ome.xml.meta.MetadataStore
public void setRectangleStrokeColor(ome.xml.model.primitives.Color stroke, int ROIIndex, int shapeIndex)
setRectangleStrokeColor
インタフェース内 ome.xml.meta.MetadataStore
public void setRectangleStrokeDashArray(java.lang.String strokeDashArray, int ROIIndex, int shapeIndex)
setRectangleStrokeDashArray
インタフェース内 ome.xml.meta.MetadataStore
public void setRectangleStrokeWidth(java.lang.Double strokeWidth, int ROIIndex, int shapeIndex)
setRectangleStrokeWidth
インタフェース内 ome.xml.meta.MetadataStore
public void setRectangleTheC(ome.xml.model.primitives.NonNegativeInteger theC, int ROIIndex, int shapeIndex)
setRectangleTheC
インタフェース内 ome.xml.meta.MetadataStore
public void setRectangleTheT(ome.xml.model.primitives.NonNegativeInteger theT, int ROIIndex, int shapeIndex)
setRectangleTheT
インタフェース内 ome.xml.meta.MetadataStore
public void setRectangleTheZ(ome.xml.model.primitives.NonNegativeInteger theZ, int ROIIndex, int shapeIndex)
setRectangleTheZ
インタフェース内 ome.xml.meta.MetadataStore
public void setRectangleTransform(ome.xml.model.AffineTransform transform, int ROIIndex, int shapeIndex)
setRectangleTransform
インタフェース内 ome.xml.meta.MetadataStore
public void setRectangleWidth(java.lang.Double width, int ROIIndex, int shapeIndex)
setRectangleWidth
インタフェース内 ome.xml.meta.MetadataStore
public void setRectangleX(java.lang.Double x, int ROIIndex, int shapeIndex)
setRectangleX
インタフェース内 ome.xml.meta.MetadataStore
public void setRectangleY(java.lang.Double y, int ROIIndex, int shapeIndex)
setRectangleY
インタフェース内 ome.xml.meta.MetadataStore
public void setRoot(ome.xml.meta.MetadataRoot root)
setRoot
インタフェース内 ome.xml.meta.MetadataStore
@Deprecated public void setRoot(java.lang.Object root)
setRoot
インタフェース内 ome.xml.meta.MetadataStore
public void setScreenID(java.lang.String id, int screenIndex)
setScreenID
インタフェース内 ome.xml.meta.MetadataStore
public void setScreenAnnotationRef(java.lang.String annotation, int screenIndex, int annotationRefIndex)
setScreenAnnotationRef
インタフェース内 ome.xml.meta.MetadataStore
public void setScreenDescription(java.lang.String description, int screenIndex)
setScreenDescription
インタフェース内 ome.xml.meta.MetadataStore
public void setScreenName(java.lang.String name, int screenIndex)
setScreenName
インタフェース内 ome.xml.meta.MetadataStore
public void setScreenPlateRef(java.lang.String plate, int screenIndex, int plateRefIndex)
setScreenPlateRef
インタフェース内 ome.xml.meta.MetadataStore
public void setScreenProtocolDescription(java.lang.String protocolDescription, int screenIndex)
setScreenProtocolDescription
インタフェース内 ome.xml.meta.MetadataStore
public void setScreenProtocolIdentifier(java.lang.String protocolIdentifier, int screenIndex)
setScreenProtocolIdentifier
インタフェース内 ome.xml.meta.MetadataStore
public void setScreenReagentSetDescription(java.lang.String reagentSetDescription, int screenIndex)
setScreenReagentSetDescription
インタフェース内 ome.xml.meta.MetadataStore
public void setScreenReagentSetIdentifier(java.lang.String reagentSetIdentifier, int screenIndex)
setScreenReagentSetIdentifier
インタフェース内 ome.xml.meta.MetadataStore
public void setScreenType(java.lang.String type, int screenIndex)
setScreenType
インタフェース内 ome.xml.meta.MetadataStore
public void setStageLabelName(java.lang.String name, int imageIndex)
setStageLabelName
インタフェース内 ome.xml.meta.MetadataStore
public void setStageLabelX(java.lang.Double x, int imageIndex)
setStageLabelX
インタフェース内 ome.xml.meta.MetadataStore
public void setStageLabelY(java.lang.Double y, int imageIndex)
setStageLabelY
インタフェース内 ome.xml.meta.MetadataStore
public void setStageLabelZ(java.lang.Double z, int imageIndex)
setStageLabelZ
インタフェース内 ome.xml.meta.MetadataStore
public void setCommentAnnotationID(java.lang.String id, int commentAnnotationIndex)
setCommentAnnotationID
インタフェース内 ome.xml.meta.MetadataStore
public void setCommentAnnotationNamespace(java.lang.String namespace, int commentAnnotationIndex)
setCommentAnnotationNamespace
インタフェース内 ome.xml.meta.MetadataStore
public void setCommentAnnotationAnnotator(java.lang.String value, int index)
setCommentAnnotationAnnotator
インタフェース内 ome.xml.meta.MetadataStore
public void setCommentAnnotationValue(java.lang.String value, int commentAnnotationIndex)
setCommentAnnotationValue
インタフェース内 ome.xml.meta.MetadataStore
public void setLabelID(java.lang.String id, int ROIIndex, int shapeIndex)
setLabelID
インタフェース内 ome.xml.meta.MetadataStore
public void setLabelText(java.lang.String text, int ROIIndex, int shapeIndex)
setLabelText
インタフェース内 ome.xml.meta.MetadataStore
public void setLabelFillColor(ome.xml.model.primitives.Color fill, int ROIIndex, int shapeIndex)
setLabelFillColor
インタフェース内 ome.xml.meta.MetadataStore
public void setLabelFontSize(ome.xml.model.primitives.NonNegativeInteger fontSize, int ROIIndex, int shapeIndex)
setLabelFontSize
インタフェース内 ome.xml.meta.MetadataStore
public void setLabelStrokeColor(ome.xml.model.primitives.Color stroke, int ROIIndex, int shapeIndex)
setLabelStrokeColor
インタフェース内 ome.xml.meta.MetadataStore
public void setLabelStrokeDashArray(java.lang.String strokeDashArray, int ROIIndex, int shapeIndex)
setLabelStrokeDashArray
インタフェース内 ome.xml.meta.MetadataStore
public void setLabelStrokeWidth(java.lang.Double strokeWidth, int ROIIndex, int shapeIndex)
setLabelStrokeWidth
インタフェース内 ome.xml.meta.MetadataStore
public void setLabelTheC(ome.xml.model.primitives.NonNegativeInteger theC, int ROIIndex, int shapeIndex)
setLabelTheC
インタフェース内 ome.xml.meta.MetadataStore
public void setLabelTheT(ome.xml.model.primitives.NonNegativeInteger theT, int ROIIndex, int shapeIndex)
setLabelTheT
インタフェース内 ome.xml.meta.MetadataStore
public void setLabelTheZ(ome.xml.model.primitives.NonNegativeInteger theZ, int ROIIndex, int shapeIndex)
setLabelTheZ
インタフェース内 ome.xml.meta.MetadataStore
public void setLabelTransform(ome.xml.model.AffineTransform transform, int ROIIndex, int shapeIndex)
setLabelTransform
インタフェース内 ome.xml.meta.MetadataStore
public void setLabelX(java.lang.Double x, int ROIIndex, int shapeIndex)
setLabelX
インタフェース内 ome.xml.meta.MetadataStore
public void setLabelY(java.lang.Double y, int ROIIndex, int shapeIndex)
setLabelY
インタフェース内 ome.xml.meta.MetadataStore
public void setTiffDataFirstC(ome.xml.model.primitives.NonNegativeInteger firstC, int imageIndex, int tiffDataIndex)
setTiffDataFirstC
インタフェース内 ome.xml.meta.MetadataStore
public void setTiffDataFirstT(ome.xml.model.primitives.NonNegativeInteger firstT, int imageIndex, int tiffDataIndex)
setTiffDataFirstT
インタフェース内 ome.xml.meta.MetadataStore
public void setTiffDataFirstZ(ome.xml.model.primitives.NonNegativeInteger firstZ, int imageIndex, int tiffDataIndex)
setTiffDataFirstZ
インタフェース内 ome.xml.meta.MetadataStore
public void setTiffDataIFD(ome.xml.model.primitives.NonNegativeInteger ifd, int imageIndex, int tiffDataIndex)
setTiffDataIFD
インタフェース内 ome.xml.meta.MetadataStore
public void setTiffDataPlaneCount(ome.xml.model.primitives.NonNegativeInteger planeCount, int imageIndex, int tiffDataIndex)
setTiffDataPlaneCount
インタフェース内 ome.xml.meta.MetadataStore
public void setTimestampAnnotationID(java.lang.String id, int timestampAnnotationIndex)
setTimestampAnnotationID
インタフェース内 ome.xml.meta.MetadataStore
public void setTimestampAnnotationNamespace(java.lang.String namespace, int timestampAnnotationIndex)
setTimestampAnnotationNamespace
インタフェース内 ome.xml.meta.MetadataStore
public void setTimestampAnnotationValue(ome.xml.model.primitives.Timestamp value, int timestampAnnotationIndex)
setTimestampAnnotationValue
インタフェース内 ome.xml.meta.MetadataStore
public void setTransmittanceRangeCutIn(ome.xml.model.primitives.PositiveInteger cutIn, int instrumentIndex, int filterIndex)
setTransmittanceRangeCutIn
インタフェース内 ome.xml.meta.MetadataStore
public void setTransmittanceRangeCutInTolerance(ome.xml.model.primitives.NonNegativeInteger cutInTolerance, int instrumentIndex, int filterIndex)
setTransmittanceRangeCutInTolerance
インタフェース内 ome.xml.meta.MetadataStore
public void setTransmittanceRangeCutOut(ome.xml.model.primitives.PositiveInteger cutOut, int instrumentIndex, int filterIndex)
setTransmittanceRangeCutOut
インタフェース内 ome.xml.meta.MetadataStore
public void setTransmittanceRangeCutOutTolerance(ome.xml.model.primitives.NonNegativeInteger cutOutTolerance, int instrumentIndex, int filterIndex)
setTransmittanceRangeCutOutTolerance
インタフェース内 ome.xml.meta.MetadataStore
public void setTransmittanceRangeTransmittance(ome.xml.model.primitives.PercentFraction transmittance, int instrumentIndex, int filterIndex)
setTransmittanceRangeTransmittance
インタフェース内 ome.xml.meta.MetadataStore
public void setUUID(java.lang.String uuid)
setUUID
インタフェース内 ome.xml.meta.MetadataStore
public void setUUIDFileName(java.lang.String fileName, int imageIndex, int tiffDataIndex)
setUUIDFileName
インタフェース内 ome.xml.meta.MetadataStore
public void setUUIDValue(java.lang.String fileName, int imageIndex, int tiffDataIndex)
setUUIDValue
インタフェース内 ome.xml.meta.MetadataStore
public void setWellID(java.lang.String id, int plateIndex, int wellIndex)
setWellID
インタフェース内 ome.xml.meta.MetadataStore
public void setWellAnnotationRef(java.lang.String annotation, int plateIndex, int wellIndex, int annotationRefIndex)
setWellAnnotationRef
インタフェース内 ome.xml.meta.MetadataStore
public void setWellColor(ome.xml.model.primitives.Color color, int plateIndex, int wellIndex)
setWellColor
インタフェース内 ome.xml.meta.MetadataStore
public void setWellColumn(ome.xml.model.primitives.NonNegativeInteger column, int plateIndex, int wellIndex)
setWellColumn
インタフェース内 ome.xml.meta.MetadataStore
public void setWellExternalDescription(java.lang.String externalDescription, int plateIndex, int wellIndex)
setWellExternalDescription
インタフェース内 ome.xml.meta.MetadataStore
public void setWellExternalIdentifier(java.lang.String externalIdentifier, int plateIndex, int wellIndex)
setWellExternalIdentifier
インタフェース内 ome.xml.meta.MetadataStore
public void setWellReagentRef(java.lang.String reagent, int plateIndex, int wellIndex)
setWellReagentRef
インタフェース内 ome.xml.meta.MetadataStore
public void setWellRow(ome.xml.model.primitives.NonNegativeInteger row, int plateIndex, int wellIndex)
setWellRow
インタフェース内 ome.xml.meta.MetadataStore
public void setWellStatus(java.lang.String status, int plateIndex, int wellIndex)
public void setWellSampleID(java.lang.String id, int plateIndex, int wellIndex, int wellSampleIndex)
setWellSampleID
インタフェース内 ome.xml.meta.MetadataStore
public void setWellSampleAnnotationRef(java.lang.String annotation, int plateIndex, int wellIndex, int wellSampleIndex, int annotationRefIndex)
setWellSampleAnnotationRef
インタフェース内 ome.xml.meta.MetadataStore
public void setWellSampleImageRef(java.lang.String image, int plateIndex, int wellIndex, int wellSampleIndex)
setWellSampleImageRef
インタフェース内 ome.xml.meta.MetadataStore
public void setWellSampleIndex(ome.xml.model.primitives.NonNegativeInteger index, int plateIndex, int wellIndex, int wellSampleIndex)
setWellSampleIndex
インタフェース内 ome.xml.meta.MetadataStore
public void setWellSamplePositionX(java.lang.Double positionX, int plateIndex, int wellIndex, int wellSampleIndex)
setWellSamplePositionX
インタフェース内 ome.xml.meta.MetadataStore
public void setWellSamplePositionY(java.lang.Double positionY, int plateIndex, int wellIndex, int wellSampleIndex)
setWellSamplePositionY
インタフェース内 ome.xml.meta.MetadataStore
public void setWellSampleTimepoint(ome.xml.model.primitives.Timestamp timepoint, int plateIndex, int wellIndex, int wellSampleIndex)
setWellSampleTimepoint
インタフェース内 ome.xml.meta.MetadataStore
public void setXMLAnnotationID(java.lang.String id, int XMLAnnotationIndex)
setXMLAnnotationID
インタフェース内 ome.xml.meta.MetadataStore
public void setXMLAnnotationNamespace(java.lang.String namespace, int XMLAnnotationIndex)
setXMLAnnotationNamespace
インタフェース内 ome.xml.meta.MetadataStore
public void setXMLAnnotationValue(java.lang.String value, int XMLAnnotationIndex)
setXMLAnnotationValue
インタフェース内 ome.xml.meta.MetadataStore
public void setXMLAnnotationAnnotator(java.lang.String value, int index)
setXMLAnnotationAnnotator
インタフェース内 ome.xml.meta.MetadataStore
public void setXMLAnnotationAnnotationRef(java.lang.String annotation, int XMLAnnotationIndex, int annotationRefIndex)
setXMLAnnotationAnnotationRef
インタフェース内 ome.xml.meta.MetadataStore
public void setXMLAnnotationDescription(java.lang.String description, int XMLAnnotationIndex)
setXMLAnnotationDescription
インタフェース内 ome.xml.meta.MetadataStore
public void setBooleanAnnotationAnnotationRef(java.lang.String annotation, int booleanAnnotationIndex, int annotationRefIndex)
setBooleanAnnotationAnnotationRef
インタフェース内 ome.xml.meta.MetadataStore
public void setBooleanAnnotationDescription(java.lang.String description, int booleanAnnotationIndex)
setBooleanAnnotationDescription
インタフェース内 ome.xml.meta.MetadataStore
public void setBooleanAnnotationAnnotator(java.lang.String value, int index)
setBooleanAnnotationAnnotator
インタフェース内 ome.xml.meta.MetadataStore
public void setCommentAnnotationAnnotationRef(java.lang.String annotation, int commentAnnotationIndex, int annotationRefIndex)
setCommentAnnotationAnnotationRef
インタフェース内 ome.xml.meta.MetadataStore
public void setCommentAnnotationDescription(java.lang.String description, int commentAnnotationIndex)
setCommentAnnotationDescription
インタフェース内 ome.xml.meta.MetadataStore
public void setDoubleAnnotationAnnotationRef(java.lang.String annotation, int doubleAnnotationIndex, int annotationRefIndex)
setDoubleAnnotationAnnotationRef
インタフェース内 ome.xml.meta.MetadataStore
public void setDoubleAnnotationDescription(java.lang.String description, int doubleAnnotationIndex)
setDoubleAnnotationDescription
インタフェース内 ome.xml.meta.MetadataStore
public void setDoubleAnnotationAnnotator(java.lang.String value, int index)
setDoubleAnnotationAnnotator
インタフェース内 ome.xml.meta.MetadataStore
public void setFileAnnotationAnnotationRef(java.lang.String annotation, int fileAnnotationIndex, int annotationRefIndex)
setFileAnnotationAnnotationRef
インタフェース内 ome.xml.meta.MetadataStore
public void setFileAnnotationDescription(java.lang.String description, int fileAnnotationIndex)
setFileAnnotationDescription
インタフェース内 ome.xml.meta.MetadataStore
public void setFileAnnotationAnnotator(java.lang.String value, int index)
setFileAnnotationAnnotator
インタフェース内 ome.xml.meta.MetadataStore
public void setListAnnotationDescription(java.lang.String description, int listAnnotationIndex)
setListAnnotationDescription
インタフェース内 ome.xml.meta.MetadataStore
public void setListAnnotationAnnotator(java.lang.String value, int index)
setListAnnotationAnnotator
インタフェース内 ome.xml.meta.MetadataStore
public void setLongAnnotationAnnotationRef(java.lang.String annotation, int longAnnotationIndex, int annotationRefIndex)
setLongAnnotationAnnotationRef
インタフェース内 ome.xml.meta.MetadataStore
public void setLongAnnotationDescription(java.lang.String description, int longAnnotationIndex)
setLongAnnotationDescription
インタフェース内 ome.xml.meta.MetadataStore
public void setLongAnnotationAnnotator(java.lang.String value, int XMLAnnotationIndex)
setLongAnnotationAnnotator
インタフェース内 ome.xml.meta.MetadataStore
public void setTagAnnotationAnnotationRef(java.lang.String annotation, int tagAnnotationIndex, int annotationRefIndex)
setTagAnnotationAnnotationRef
インタフェース内 ome.xml.meta.MetadataStore
public void setTagAnnotationDescription(java.lang.String description, int tagAnnotationIndex)
setTagAnnotationDescription
インタフェース内 ome.xml.meta.MetadataStore
public void setTagAnnotationID(java.lang.String id, int tagAnnotationIndex)
setTagAnnotationID
インタフェース内 ome.xml.meta.MetadataStore
public void setTagAnnotationNamespace(java.lang.String namespace, int tagAnnotationIndex)
setTagAnnotationNamespace
インタフェース内 ome.xml.meta.MetadataStore
public void setTagAnnotationAnnotator(java.lang.String value, int index)
setTagAnnotationAnnotator
インタフェース内 ome.xml.meta.MetadataStore
public void setTagAnnotationValue(java.lang.String value, int tagAnnotationIndex)
setTagAnnotationValue
インタフェース内 ome.xml.meta.MetadataStore
public void setTermAnnotationAnnotationRef(java.lang.String annotation, int termAnnotationIndex, int annotationRefIndex)
setTermAnnotationAnnotationRef
インタフェース内 ome.xml.meta.MetadataStore
public void setTermAnnotationDescription(java.lang.String description, int termAnnotationIndex)
setTermAnnotationDescription
インタフェース内 ome.xml.meta.MetadataStore
public void setTermAnnotationID(java.lang.String id, int termAnnotationIndex)
setTermAnnotationID
インタフェース内 ome.xml.meta.MetadataStore
public void setTermAnnotationNamespace(java.lang.String namespace, int termAnnotationIndex)
setTermAnnotationNamespace
インタフェース内 ome.xml.meta.MetadataStore
public void setTermAnnotationAnnotator(java.lang.String value, int index)
setTermAnnotationAnnotator
インタフェース内 ome.xml.meta.MetadataStore
public void setTermAnnotationValue(java.lang.String value, int termAnnotationIndex)
setTermAnnotationValue
インタフェース内 ome.xml.meta.MetadataStore
public void setTimestampAnnotationAnnotationRef(java.lang.String annotation, int timestampAnnotationIndex, int annotationRefIndex)
setTimestampAnnotationAnnotationRef
インタフェース内 ome.xml.meta.MetadataStore
public void setTimestampAnnotationDescription(java.lang.String description, int timestampAnnotationIndex)
setTimestampAnnotationDescription
インタフェース内 ome.xml.meta.MetadataStore
public void setTimestampAnnotationAnnotator(java.lang.String value, int index)
setTimestampAnnotationAnnotator
インタフェース内 ome.xml.meta.MetadataStore
public void setPlateFieldIndex(ome.xml.model.primitives.NonNegativeInteger fieldIndex, int plateIndex)
setPlateFieldIndex
インタフェース内 ome.xml.meta.MetadataStore
public void setBinaryFileFileName(java.lang.String fileName, int fileAnnotationIndex)
setBinaryFileFileName
インタフェース内 ome.xml.meta.MetadataStore
public void setBinaryFileMIMEType(java.lang.String mimeType, int fileAnnotationIndex)
setBinaryFileMIMEType
インタフェース内 ome.xml.meta.MetadataStore
public void setBinaryFileSize(ome.xml.model.primitives.NonNegativeLong size, int fileAnnotationIndex)
setBinaryFileSize
インタフェース内 ome.xml.meta.MetadataStore
public void setDatasetImageRef(java.lang.String image, int datasetIndex, int imageRefIndex)
setDatasetImageRef
インタフェース内 ome.xml.meta.MetadataStore
public void setEllipseFillRule(ome.xml.model.enums.FillRule fillRule, int ROIIndex, int shapeIndex)
setEllipseFillRule
インタフェース内 ome.xml.meta.MetadataStore
public void setEllipseFontFamily(ome.xml.model.enums.FontFamily fontFamily, int ROIIndex, int shapeIndex)
setEllipseFontFamily
インタフェース内 ome.xml.meta.MetadataStore
public void setEllipseFontStyle(ome.xml.model.enums.FontStyle fontStyle, int ROIIndex, int shapeIndex)
setEllipseFontStyle
インタフェース内 ome.xml.meta.MetadataStore
public void setEllipseLineCap(ome.xml.model.enums.LineCap lineCap, int ROIIndex, int shapeIndex)
setEllipseLineCap
インタフェース内 ome.xml.meta.MetadataStore
public void setEllipseLocked(java.lang.Boolean locked, int ROIIndex, int shapeIndex)
setEllipseLocked
インタフェース内 ome.xml.meta.MetadataStore
public void setEllipseVisible(java.lang.Boolean visible, int ROIIndex, int shapeIndex)
setEllipseVisible
インタフェース内 ome.xml.meta.MetadataStore
public void setExperimenterGroupAnnotationRef(java.lang.String annotation, int experimenterGroupIndex, int annotationRefIndex)
setExperimenterGroupAnnotationRef
インタフェース内 ome.xml.meta.MetadataStore
public void setExperimenterGroupExperimenterRef(java.lang.String experimenter, int experimenterGroupIndex, int experimenterRefIndex)
setExperimenterGroupExperimenterRef
インタフェース内 ome.xml.meta.MetadataStore
public void setLabelFillRule(ome.xml.model.enums.FillRule fillRule, int ROIIndex, int shapeIndex)
setLabelFillRule
インタフェース内 ome.xml.meta.MetadataStore
public void setLabelFontFamily(ome.xml.model.enums.FontFamily fontFamily, int ROIIndex, int shapeIndex)
setLabelFontFamily
インタフェース内 ome.xml.meta.MetadataStore
public void setLabelFontStyle(ome.xml.model.enums.FontStyle fontStyle, int ROIIndex, int shapeIndex)
setLabelFontStyle
インタフェース内 ome.xml.meta.MetadataStore
public void setLabelLineCap(ome.xml.model.enums.LineCap lineCap, int ROIIndex, int shapeIndex)
setLabelLineCap
インタフェース内 ome.xml.meta.MetadataStore
public void setLabelLocked(java.lang.Boolean locked, int ROIIndex, int shapeIndex)
setLabelLocked
インタフェース内 ome.xml.meta.MetadataStore
public void setLabelVisible(java.lang.Boolean visible, int ROIIndex, int shapeIndex)
setLabelVisible
インタフェース内 ome.xml.meta.MetadataStore
public void setLineFillRule(ome.xml.model.enums.FillRule fillRule, int ROIIndex, int shapeIndex)
setLineFillRule
インタフェース内 ome.xml.meta.MetadataStore
public void setLineFontFamily(ome.xml.model.enums.FontFamily fontFamily, int ROIIndex, int shapeIndex)
setLineFontFamily
インタフェース内 ome.xml.meta.MetadataStore
public void setLineFontStyle(ome.xml.model.enums.FontStyle fontStyle, int ROIIndex, int shapeIndex)
setLineFontStyle
インタフェース内 ome.xml.meta.MetadataStore
public void setLineLineCap(ome.xml.model.enums.LineCap lineCap, int ROIIndex, int shapeIndex)
setLineLineCap
インタフェース内 ome.xml.meta.MetadataStore
public void setLineLocked(java.lang.Boolean locked, int ROIIndex, int shapeIndex)
setLineLocked
インタフェース内 ome.xml.meta.MetadataStore
public void setLineVisible(java.lang.Boolean visible, int ROIIndex, int shapeIndex)
setLineVisible
インタフェース内 ome.xml.meta.MetadataStore
public void setLineMarkerEnd(ome.xml.model.enums.Marker markerEnd, int ROIIndex, int shapeIndex)
setLineMarkerEnd
インタフェース内 ome.xml.meta.MetadataStore
public void setLineMarkerStart(ome.xml.model.enums.Marker markerStart, int ROIIndex, int shapeIndex)
setLineMarkerStart
インタフェース内 ome.xml.meta.MetadataStore
public void setMaskFillRule(ome.xml.model.enums.FillRule fillRule, int ROIIndex, int shapeIndex)
setMaskFillRule
インタフェース内 ome.xml.meta.MetadataStore
public void setMaskFontFamily(ome.xml.model.enums.FontFamily fontFamily, int ROIIndex, int shapeIndex)
setMaskFontFamily
インタフェース内 ome.xml.meta.MetadataStore
public void setMaskFontStyle(ome.xml.model.enums.FontStyle fontStyle, int ROIIndex, int shapeIndex)
setMaskFontStyle
インタフェース内 ome.xml.meta.MetadataStore
public void setMaskLineCap(ome.xml.model.enums.LineCap lineCap, int ROIIndex, int shapeIndex)
setMaskLineCap
インタフェース内 ome.xml.meta.MetadataStore
public void setMaskLocked(java.lang.Boolean locked, int ROIIndex, int shapeIndex)
setMaskLocked
インタフェース内 ome.xml.meta.MetadataStore
public void setMaskVisible(java.lang.Boolean visible, int ROIIndex, int shapeIndex)
setMaskVisible
インタフェース内 ome.xml.meta.MetadataStore
public void setPointFillRule(ome.xml.model.enums.FillRule fillRule, int ROIIndex, int shapeIndex)
setPointFillRule
インタフェース内 ome.xml.meta.MetadataStore
public void setPointFontFamily(ome.xml.model.enums.FontFamily fontFamily, int ROIIndex, int shapeIndex)
setPointFontFamily
インタフェース内 ome.xml.meta.MetadataStore
public void setPointFontStyle(ome.xml.model.enums.FontStyle fontStyle, int ROIIndex, int shapeIndex)
setPointFontStyle
インタフェース内 ome.xml.meta.MetadataStore
public void setPointLineCap(ome.xml.model.enums.LineCap lineCap, int ROIIndex, int shapeIndex)
setPointLineCap
インタフェース内 ome.xml.meta.MetadataStore
public void setPointLocked(java.lang.Boolean locked, int ROIIndex, int shapeIndex)
setPointLocked
インタフェース内 ome.xml.meta.MetadataStore
public void setPointVisible(java.lang.Boolean visible, int ROIIndex, int shapeIndex)
setPointVisible
インタフェース内 ome.xml.meta.MetadataStore
public void setPolygonFillColor(ome.xml.model.primitives.Color fillColor, int ROIIndex, int shapeIndex)
setPolygonFillColor
インタフェース内 ome.xml.meta.MetadataStore
public void setPolygonFillRule(ome.xml.model.enums.FillRule fillRule, int ROIIndex, int shapeIndex)
setPolygonFillRule
インタフェース内 ome.xml.meta.MetadataStore
public void setPolygonFontFamily(ome.xml.model.enums.FontFamily fontFamily, int ROIIndex, int shapeIndex)
setPolygonFontFamily
インタフェース内 ome.xml.meta.MetadataStore
public void setPolygonFontSize(ome.xml.model.primitives.NonNegativeInteger fontSize, int ROIIndex, int shapeIndex)
setPolygonFontSize
インタフェース内 ome.xml.meta.MetadataStore
public void setPolygonFontStyle(ome.xml.model.enums.FontStyle fontStyle, int ROIIndex, int shapeIndex)
setPolygonFontStyle
インタフェース内 ome.xml.meta.MetadataStore
public void setPolygonID(java.lang.String id, int ROIIndex, int shapeIndex)
setPolygonID
インタフェース内 ome.xml.meta.MetadataStore
public void setPolygonLineCap(ome.xml.model.enums.LineCap lineCap, int ROIIndex, int shapeIndex)
setPolygonLineCap
インタフェース内 ome.xml.meta.MetadataStore
public void setPolygonLocked(java.lang.Boolean locked, int ROIIndex, int shapeIndex)
setPolygonLocked
インタフェース内 ome.xml.meta.MetadataStore
public void setPolygonStrokeColor(ome.xml.model.primitives.Color strokeColor, int ROIIndex, int shapeIndex)
setPolygonStrokeColor
インタフェース内 ome.xml.meta.MetadataStore
public void setPolygonStrokeDashArray(java.lang.String strokeDashArray, int ROIIndex, int shapeIndex)
setPolygonStrokeDashArray
インタフェース内 ome.xml.meta.MetadataStore
public void setPolygonStrokeWidth(java.lang.Double strokeWidth, int ROIIndex, int shapeIndex)
setPolygonStrokeWidth
インタフェース内 ome.xml.meta.MetadataStore
public void setPolygonText(java.lang.String text, int ROIIndex, int shapeIndex)
setPolygonText
インタフェース内 ome.xml.meta.MetadataStore
public void setPolygonTheC(ome.xml.model.primitives.NonNegativeInteger theC, int ROIIndex, int shapeIndex)
setPolygonTheC
インタフェース内 ome.xml.meta.MetadataStore
public void setPolygonTheT(ome.xml.model.primitives.NonNegativeInteger theT, int ROIIndex, int shapeIndex)
setPolygonTheT
インタフェース内 ome.xml.meta.MetadataStore
public void setPolygonTheZ(ome.xml.model.primitives.NonNegativeInteger theZ, int ROIIndex, int shapeIndex)
setPolygonTheZ
インタフェース内 ome.xml.meta.MetadataStore
public void setPolygonTransform(ome.xml.model.AffineTransform transform, int ROIIndex, int shapeIndex)
setPolygonTransform
インタフェース内 ome.xml.meta.MetadataStore
public void setPolygonVisible(java.lang.Boolean visible, int ROIIndex, int shapeIndex)
setPolygonVisible
インタフェース内 ome.xml.meta.MetadataStore
public void setPolygonPoints(java.lang.String points, int ROIIndex, int shapeIndex)
setPolygonPoints
インタフェース内 ome.xml.meta.MetadataStore
public void setPolylineFillRule(ome.xml.model.enums.FillRule fillRule, int ROIIndex, int shapeIndex)
setPolylineFillRule
インタフェース内 ome.xml.meta.MetadataStore
public void setPolylineFontFamily(ome.xml.model.enums.FontFamily fontFamily, int ROIIndex, int shapeIndex)
setPolylineFontFamily
インタフェース内 ome.xml.meta.MetadataStore
public void setPolylineFontStyle(ome.xml.model.enums.FontStyle fontStyle, int ROIIndex, int shapeIndex)
setPolylineFontStyle
インタフェース内 ome.xml.meta.MetadataStore
public void setPolylineLineCap(ome.xml.model.enums.LineCap lineCap, int ROIIndex, int shapeIndex)
setPolylineLineCap
インタフェース内 ome.xml.meta.MetadataStore
public void setPolylineLocked(java.lang.Boolean locked, int ROIIndex, int shapeIndex)
setPolylineLocked
インタフェース内 ome.xml.meta.MetadataStore
public void setPolylineVisible(java.lang.Boolean visible, int ROIIndex, int shapeIndex)
setPolylineVisible
インタフェース内 ome.xml.meta.MetadataStore
public void setPolylineMarkerEnd(ome.xml.model.enums.Marker markerEnd, int ROIIndex, int shapeIndex)
setPolylineMarkerEnd
インタフェース内 ome.xml.meta.MetadataStore
public void setPolylineMarkerStart(ome.xml.model.enums.Marker markerStart, int ROIIndex, int shapeIndex)
setPolylineMarkerStart
インタフェース内 ome.xml.meta.MetadataStore
public void setProjectDatasetRef(java.lang.String dataset, int projectIndex, int datasetRefIndex)
setProjectDatasetRef
インタフェース内 ome.xml.meta.MetadataStore
public void setRectangleFillRule(ome.xml.model.enums.FillRule fillRule, int ROIIndex, int shapeIndex)
setRectangleFillRule
インタフェース内 ome.xml.meta.MetadataStore
public void setRectangleFontFamily(ome.xml.model.enums.FontFamily fontFamily, int ROIIndex, int shapeIndex)
setRectangleFontFamily
インタフェース内 ome.xml.meta.MetadataStore
public void setRectangleFontStyle(ome.xml.model.enums.FontStyle fontStyle, int ROIIndex, int shapeIndex)
setRectangleFontStyle
インタフェース内 ome.xml.meta.MetadataStore
public void setRectangleLineCap(ome.xml.model.enums.LineCap lineCap, int ROIIndex, int shapeIndex)
setRectangleLineCap
インタフェース内 ome.xml.meta.MetadataStore
public void setRectangleLocked(java.lang.Boolean locked, int ROIIndex, int shapeIndex)
setRectangleLocked
インタフェース内 ome.xml.meta.MetadataStore
public void setRectangleVisible(java.lang.Boolean visible, int ROIIndex, int shapeIndex)
setRectangleVisible
インタフェース内 ome.xml.meta.MetadataStore
public void setWellType(java.lang.String type, int plateIndex, int wellIndex)
setWellType
インタフェース内 ome.xml.meta.MetadataStore
public void setRightsRightsHeld(java.lang.String value)
setRightsRightsHeld
インタフェース内 ome.xml.meta.MetadataStore
public void setRightsRightsHolder(java.lang.String value)
setRightsRightsHolder
インタフェース内 ome.xml.meta.MetadataStore
public void setCurrentLogFile(java.lang.String logFilename, java.lang.String token)