ImportContainer container
java.lang.Long logFileId
omero.grid.ImportResponse importResponse
ImportLibrary.ImportCallback.onFinished(Response, Status, Current)
has
not yet been called with a non-error response. Field is volatile
because a separate Thread
will fill in the value.Ring ring
ome.services.sessions.SessionManager manager
ome.services.util.Executor ex
ome.system.Principal p
java.lang.String uuid
ome.system.Principal principal
ome.services.util.Executor executor
Redirector redirector
Ice.Communicator communicator
Registry registry
Ice.ObjectAdapter adapter
java.lang.String directProxy
SessionManager
in this blitz instance.ome.system.OmeroContext context
Ice.ObjectAdapter adapter
ome.security.SecuritySystem securitySystem
ome.services.sessions.SessionManager sessionManager
ome.services.util.Executor executor
Ring ring
Registry registry
TopicManager topicManager
java.util.concurrent.atomic.AtomicBoolean loaded
int servantsPerSession
java.util.concurrent.ConcurrentHashMap<K,V> sessionToHolder
ServiceFactoryI
instances for a given
session since there is no method on ObjectAdapter
to retrieve
all servants.Helper helper
Ice.ObjectAdapter oa
Registry reg
ome.services.util.Executor ex
ome.system.Principal p
FileMaker fileMaker
PublicRepositoryI servant
omero.model.OriginalFile description
omero.grid.RepositoryPrx proxy
java.lang.String repoUuid
java.util.concurrent.atomic.AtomicReference<V> state
java.util.List<E> checkedPaths
CheckedPath logFile
Helper helper
byte[] arrayBuf
Registry reg
ome.io.nio.TileSizes sizes
RepositoryDao dao
CheckedPath logPath
java.lang.String logFilename
omero.api.ServiceFactoryPrx sf
OMEROMetadataStoreClient store
OMEROWrapper reader
CheckedPath file
omero.model.IObject userSpecifiedTarget
java.lang.String userSpecifiedName
java.lang.String userSpecifiedDescription
double[] userPixels
java.util.List<E> annotationList
boolean doThumbnails
java.lang.String fileName
java.lang.String shortName
java.lang.String format
java.lang.String formatString
java.lang.String[] usedFiles
java.util.Map<K,V> objects
java.util.List<E> pixList
java.util.List<E> imageList
java.util.List<E> plateList
boolean autoClose
java.lang.String token
omero.cmd.HandlePrx handle
Ice.ObjectAdapter adapter
Ice.Identity id
java.util.concurrent.CountDownLatch latch
#finished(Response, Current)
is
called. Other methods will block on this value.java.util.concurrent.CountDownLatch isInitialized
java.util.concurrent.CountDownLatch isOnFinishedDone
java.util.concurrent.atomic.AtomicReference<V> state
omero.cmd.HandlePrx handle
omero.cmd.HandlePrx source
java.lang.String category
java.lang.String name
java.util.List<E> flags
java.util.Map<K,V> parameters
int steps
long startTime
long[] stepStartTimes
long[] stepStopTimes
long stopTime
java.util.List<E> substeps
int current
int nextAt
java.util.List<E> statuses
java.util.List<E> responses
Helper helper
ome.system.OmeroContext ctx
ome.system.OmeroContext ctx
Helper helper
java.util.concurrent.CountDownLatch latch
Helper helper
omero.cmd.ManageImageBinariesResponse rsp
ome.io.nio.PixelsService pixelsService
ome.security.ACLVoter voter
Helper helper
omero.cmd.fs.ManageImageBinariesI.PixelFiles files
java.util.List<E> thumbnailFiles
omero.cmd.OriginalMetadataResponse rsp
ome.io.nio.PixelsService pixelsService
Helper helper
ome.services.chgrp.ChgrpStepFactory factory
org.springframework.context.ApplicationContext specs
ome.services.graphs.GraphSpec spec
ome.services.graphs.GraphState state
Helper helper
Ice.Communicator ic
ome.security.ChmodStrategy strategy
Helper helper
ome.model.IObject target
java.lang.Object[] checks
Ice.Communicator ic
ome.services.chown.ChownStepFactory factory
org.springframework.context.ApplicationContext specs
ome.services.graphs.GraphSpec spec
ome.services.graphs.GraphState state
Helper helper
Ice.Communicator ic
ome.services.delete.Deletion delegate
Helper helper
Ice.Communicator ic
ome.system.OmeroContext ctx
Helper helper
java.lang.String clientUuid
java.lang.String repoUuid
omero.grid.ImportProcessPrx process
omero.model.FilesetJobLink activity
omero.grid.ImportSettings settings
omero.grid.ImportLocation location
omero.model.OriginalFile logFile
omero.model.IObject userSpecifiedTarget
omero.RString userSpecifiedName
omero.RString userSpecifiedDescription
double[] userSpecifiedPixels
java.util.List<E> userSpecifiedAnnotationList
omero.RBool doThumbnails
omero.model.ChecksumAlgorithm checksumAlgorithm
java.lang.String name
java.lang.String version
java.lang.String description
java.lang.String contact
java.lang.String[] authors
java.lang.String[] institutions
int[][] authorsInstitutions
java.util.Map<K,V> inputs
java.util.Map<K,V> outputs
java.lang.String stdoutFormat
java.lang.String stderrFormat
java.util.List<E> namespaces
Ice.ObjectAdapter adapter
Ice.Identity id
java.util.concurrent.BlockingQueue<E> q
boolean poll
omero.grid.ProcessPrx process
omero.RInt version
omero.model.StatsInfo statsInfo
omero.RInt red
omero.RInt green
omero.RInt blue
omero.RInt alpha
omero.model.LogicalChannel logicalChannel
omero.model.Pixels pixels
java.util.List<E> annotationLinksSeq
boolean annotationLinksLoaded
java.util.Map<K,V> annotationLinksCountPerOwner
omero.RInt version
omero.model.RenderingDef renderingDef
omero.model.Family family
omero.RDouble coefficient
omero.RDouble inputStart
omero.RDouble inputEnd
omero.RBool active
omero.RBool noiseReduction
omero.RInt red
omero.RInt green
omero.RInt blue
omero.RInt alpha
omero.RInt version
java.util.List<E> projectLinksSeq
boolean projectLinksLoaded
java.util.Map<K,V> projectLinksCountPerOwner
java.util.List<E> imageLinksSeq
boolean imageLinksLoaded
java.util.Map<K,V> imageLinksCountPerOwner
java.util.List<E> annotationLinksSeq
boolean annotationLinksLoaded
java.util.Map<K,V> annotationLinksCountPerOwner
omero.RString name
omero.RString description
omero.model.Experimenter owner
omero.model.ExperimenterGroup group
omero.model.Event creationEvent
omero.model.Event updateEvent
omero.model.Permissions permissions
omero.model.ExternalInfo externalInfo
java.util.Map<K,V> call
omero.sys.EventContext event
client client
omero.api.ServiceFactoryPrx session
omero.RInt version
omero.RString manufacturer
omero.RString model
omero.RString lotNumber
omero.RString serialNumber
omero.RDouble voltage
omero.RDouble gain
omero.RDouble offsetValue
omero.RDouble zoom
omero.RDouble amplificationGain
omero.model.DetectorType type
omero.model.Instrument instrument
omero.RInt version
omero.RDouble voltage
omero.RDouble gain
omero.RDouble offsetValue
omero.RDouble readOutRate
omero.model.Binning binning
omero.RInt integration
omero.RDouble zoom
omero.model.Detector detector
omero.RString status
omero.RTime time
omero.model.Experimenter experimenter
omero.model.ExperimenterGroup experimenterGroup
omero.model.EventType type
omero.model.Event containingEvent
java.util.List<E> logsSeq
boolean logsLoaded
omero.model.Session session
omero.RInt version
java.util.List<E> groupExperimenterMapSeq
boolean groupExperimenterMapLoaded
omero.RString omeName
omero.RString firstName
omero.RString middleName
omero.RString lastName
omero.RString institution
omero.RString email
java.util.List<E> annotationLinksSeq
boolean annotationLinksLoaded
java.util.Map<K,V> annotationLinksCountPerOwner
omero.RInt version
omero.RString name
java.util.List<E> groupExperimenterMapSeq
boolean groupExperimenterMapLoaded
java.util.List<E> annotationLinksSeq
boolean annotationLinksLoaded
java.util.Map<K,V> annotationLinksCountPerOwner
omero.RString description
omero.RInt version
java.util.List<E> usedFilesSeq
boolean usedFilesLoaded
java.util.List<E> imagesSeq
boolean imagesLoaded
java.util.List<E> jobLinksSeq
boolean jobLinksLoaded
java.util.Map<K,V> jobLinksCountPerOwner
omero.RString templatePrefix
java.util.List<E> annotationLinksSeq
boolean annotationLinksLoaded
java.util.Map<K,V> annotationLinksCountPerOwner
omero.RInt version
omero.RString bioformatsReader
omero.RString bioformatsVersion
omero.RString omeroVersion
omero.RString osArchitecture
omero.RString osName
omero.RString osVersion
omero.RString locale
omero.RInt version
omero.RString manufacturer
omero.RString model
omero.RString lotNumber
omero.RString serialNumber
omero.RString filterWheel
omero.model.FilterType type
omero.model.TransmittanceRange transmittanceRange
omero.model.Instrument instrument
java.util.List<E> excitationFilterLinkSeq
boolean excitationFilterLinkLoaded
java.util.Map<K,V> excitationFilterLinkCountPerOwner
java.util.List<E> emissionFilterLinkSeq
boolean emissionFilterLinkLoaded
java.util.Map<K,V> emissionFilterLinkCountPerOwner
omero.RInt version
omero.RString manufacturer
omero.RString model
omero.RString lotNumber
omero.RString serialNumber
omero.model.Instrument instrument
java.util.List<E> excitationFilterLinkSeq
boolean excitationFilterLinkLoaded
java.util.Map<K,V> excitationFilterLinkCountPerOwner
omero.model.Dichroic dichroic
java.util.List<E> emissionFilterLinkSeq
boolean emissionFilterLinkLoaded
java.util.Map<K,V> emissionFilterLinkCountPerOwner
omero.RInt version
omero.RTime acquisitionDate
omero.RBool archived
omero.RBool partial
omero.model.Format format
omero.model.ImagingEnvironment imagingEnvironment
omero.model.ObjectiveSettings objectiveSettings
omero.model.Instrument instrument
omero.model.StageLabel stageLabel
omero.model.Experiment experiment
java.util.List<E> pixelsSeq
boolean pixelsLoaded
java.util.List<E> wellSamplesSeq
boolean wellSamplesLoaded
java.util.List<E> roisSeq
boolean roisLoaded
java.util.List<E> datasetLinksSeq
boolean datasetLinksLoaded
java.util.Map<K,V> datasetLinksCountPerOwner
omero.model.Fileset fileset
java.util.List<E> annotationLinksSeq
boolean annotationLinksLoaded
java.util.Map<K,V> annotationLinksCountPerOwner
omero.RString name
omero.RString description
omero.RInt version
omero.model.Microscope microscope
java.util.List<E> detectorSeq
boolean detectorLoaded
java.util.List<E> objectiveSeq
boolean objectiveLoaded
java.util.List<E> lightSourceSeq
boolean lightSourceLoaded
java.util.List<E> filterSeq
boolean filterLoaded
java.util.List<E> dichroicSeq
boolean dichroicLoaded
java.util.List<E> filterSetSeq
boolean filterSetLoaded
java.util.List<E> otfSeq
boolean otfLoaded
omero.RInt version
omero.RString username
omero.RString groupname
omero.RString type
omero.RString message
omero.model.JobStatus status
omero.RTime submitted
omero.RTime scheduledFor
omero.RTime started
omero.RTime finished
java.util.List<E> originalFileLinksSeq
boolean originalFileLinksLoaded
java.util.Map<K,V> originalFileLinksCountPerOwner
omero.RDouble x
omero.RDouble y
omero.RString textValue
omero.RString anchor
omero.RString decoration
omero.RString baselineShift
omero.RInt glyphOrientationVertical
omero.RString direction
omero.RString writingMode
omero.model.LaserType type
omero.model.LaserMedium laserMedium
omero.RInt frequencyMultiplication
omero.RBool tuneable
omero.model.Pulse pulse
omero.RInt wavelength
omero.RBool pockelCell
omero.model.LightSource pump
omero.RDouble repetitionRate
omero.RInt version
java.util.List<E> excitationFilterLinkSeq
boolean excitationFilterLinkLoaded
java.util.Map<K,V> excitationFilterLinkCountPerOwner
omero.model.Dichroic dichroic
java.util.List<E> emissionFilterLinkSeq
boolean emissionFilterLinkLoaded
java.util.Map<K,V> emissionFilterLinkCountPerOwner
omero.RInt version
omero.RString name
omero.RDouble pinHoleSize
omero.model.Illumination illumination
omero.model.ContrastMethod contrastMethod
omero.RInt excitationWave
omero.RInt emissionWave
omero.RString fluor
omero.RDouble ndFilter
omero.model.OTF otf
omero.model.DetectorSettings detectorSettings
omero.model.LightSettings lightSourceSettings
omero.model.FilterSet filterSet
omero.RInt samplesPerPixel
omero.model.PhotometricInterpretation photometricInterpretation
omero.model.AcquisitionMode mode
omero.RInt pockelCellSetting
java.util.List<E> channelsSeq
boolean channelsLoaded
omero.model.LightPath lightPath
omero.RInt version
java.lang.String[] keywords
omero.RBool multivalued
omero.RBool display
java.util.List<E> annotationLinksSeq
boolean annotationLinksLoaded
java.util.Map<K,V> annotationLinksCountPerOwner
omero.RString name
omero.RString description
omero.RInt version
java.util.List<E> sessionsSeq
boolean sessionsLoaded
omero.RString uuid
omero.RString conn
omero.RTime up
omero.RTime down
omero.RInt scale
java.util.List<E> annotationLinksSeq
boolean annotationLinksLoaded
java.util.Map<K,V> annotationLinksCountPerOwner
omero.RInt version
omero.RString manufacturer
omero.RString model
omero.RString lotNumber
omero.RString serialNumber
omero.RDouble nominalMagnification
omero.RDouble calibratedMagnification
omero.RDouble lensNA
omero.model.Immersion immersion
omero.model.Correction correction
omero.RDouble workingDistance
omero.RBool iris
omero.model.Instrument instrument
omero.RInt version
java.util.List<E> pixelsFileMapsSeq
boolean pixelsFileMapsLoaded
java.util.Map<K,V> pixelsFileMapsCountPerOwner
omero.RString path
omero.RLong size
omero.RTime atime
omero.RTime mtime
omero.RTime ctime
omero.model.ChecksumAlgorithm hasher
omero.RString hash
omero.RString mimetype
java.util.List<E> annotationLinksSeq
boolean annotationLinksLoaded
java.util.Map<K,V> annotationLinksCountPerOwner
omero.RString name
omero.RInt version
omero.RInt sizeX
omero.RInt sizeY
omero.RBool opticalAxisAveraged
omero.model.PixelsType pixelsType
omero.RString path
omero.model.FilterSet filterSet
omero.model.Objective objective
omero.model.Instrument instrument
omero.RInt version
omero.model.Image image
omero.model.Pixels relatedTo
omero.model.PixelsType pixelsType
omero.RInt significantBits
omero.RInt sizeX
omero.RInt sizeY
omero.RInt sizeZ
omero.RInt sizeC
omero.RInt sizeT
omero.RString sha1
omero.model.DimensionOrder dimensionOrder
omero.RDouble physicalSizeX
omero.RDouble physicalSizeY
omero.RDouble physicalSizeZ
omero.RInt waveStart
omero.RInt waveIncrement
omero.RDouble timeIncrement
omero.RString methodology
java.util.List<E> planeInfoSeq
boolean planeInfoLoaded
java.util.List<E> pixelsFileMapsSeq
boolean pixelsFileMapsLoaded
java.util.Map<K,V> pixelsFileMapsCountPerOwner
java.util.List<E> channelsSeq
boolean channelsLoaded
java.util.List<E> settingsSeq
boolean settingsLoaded
java.util.List<E> thumbnailsSeq
boolean thumbnailsLoaded
java.util.List<E> annotationLinksSeq
boolean annotationLinksLoaded
java.util.Map<K,V> annotationLinksCountPerOwner
omero.RInt version
omero.model.Pixels pixels
omero.RInt theZ
omero.RInt theC
omero.RInt theT
omero.RDouble deltaT
omero.RDouble positionX
omero.RDouble positionY
omero.RDouble positionZ
omero.RDouble exposureTime
java.util.List<E> annotationLinksSeq
boolean annotationLinksLoaded
java.util.Map<K,V> annotationLinksCountPerOwner
omero.RInt version
omero.RInt defaultSample
omero.RString columnNamingConvention
omero.RString rowNamingConvention
omero.RDouble wellOriginX
omero.RDouble wellOriginY
omero.RInt rows
omero.RInt columns
omero.RString status
omero.RString externalIdentifier
java.util.List<E> screenLinksSeq
boolean screenLinksLoaded
java.util.Map<K,V> screenLinksCountPerOwner
java.util.List<E> wellsSeq
boolean wellsLoaded
java.util.List<E> plateAcquisitionsSeq
boolean plateAcquisitionsLoaded
java.util.List<E> annotationLinksSeq
boolean annotationLinksLoaded
java.util.Map<K,V> annotationLinksCountPerOwner
omero.RString name
omero.RString description
omero.RInt version
omero.RString name
omero.RTime startTime
omero.RTime endTime
omero.RInt maximumFieldCount
omero.model.Plate plate
java.util.List<E> wellSampleSeq
boolean wellSampleLoaded
java.util.List<E> annotationLinksSeq
boolean annotationLinksLoaded
java.util.Map<K,V> annotationLinksCountPerOwner
omero.RString description
omero.RInt version
java.util.List<E> datasetLinksSeq
boolean datasetLinksLoaded
java.util.Map<K,V> datasetLinksCountPerOwner
java.util.List<E> annotationLinksSeq
boolean annotationLinksLoaded
java.util.Map<K,V> annotationLinksCountPerOwner
omero.RString name
omero.RString description
omero.RInt version
omero.RString name
omero.RString reagentIdentifier
omero.model.Screen screen
java.util.List<E> wellLinksSeq
boolean wellLinksLoaded
java.util.Map<K,V> wellLinksCountPerOwner
java.util.List<E> annotationLinksSeq
boolean annotationLinksLoaded
java.util.Map<K,V> annotationLinksCountPerOwner
omero.RString description
omero.RInt version
omero.model.Pixels pixels
omero.RInt defaultZ
omero.RInt defaultT
omero.model.RenderingModel model
java.util.List<E> waveRenderingSeq
boolean waveRenderingLoaded
omero.RString name
omero.RDouble compression
omero.model.QuantumDef quantization
java.util.List<E> spatialDomainEnhancementSeq
boolean spatialDomainEnhancementLoaded
omero.RInt version
java.util.List<E> shapesSeq
boolean shapesLoaded
omero.model.Image image
omero.model.OriginalFile source
java.lang.String[] namespaces
java.lang.String[][] keywords
java.util.List<E> annotationLinksSeq
boolean annotationLinksLoaded
java.util.Map<K,V> annotationLinksCountPerOwner
omero.RString description
omero.RInt version
omero.RString type
omero.RString protocolIdentifier
omero.RString protocolDescription
omero.RString reagentSetIdentifier
omero.RString reagentSetDescription
java.util.List<E> plateLinksSeq
boolean plateLinksLoaded
java.util.Map<K,V> plateLinksCountPerOwner
java.util.List<E> reagentsSeq
boolean reagentsLoaded
java.util.List<E> annotationLinksSeq
boolean annotationLinksLoaded
java.util.Map<K,V> annotationLinksCountPerOwner
omero.RString name
omero.RString description
omero.RInt version
omero.model.Node node
omero.RString uuid
omero.model.Experimenter owner
omero.RLong timeToIdle
omero.RLong timeToLive
omero.RTime started
omero.RTime closed
omero.RString message
omero.RString defaultEventType
omero.RString userAgent
java.util.List<E> eventsSeq
boolean eventsLoaded
java.util.List<E> annotationLinksSeq
boolean annotationLinksLoaded
java.util.Map<K,V> annotationLinksCountPerOwner
omero.RInt version
omero.RInt theZ
omero.RInt theT
omero.RInt theC
omero.model.Roi roi
omero.RBool locked
omero.RString g
omero.RString transform
omero.RString vectorEffect
omero.RBool visibility
omero.RInt fillColor
omero.RString fillRule
omero.RInt strokeColor
omero.RString strokeDashArray
omero.RInt strokeDashOffset
omero.RString strokeLineCap
omero.RString strokeLineJoin
omero.RInt strokeMiterLimit
omero.RInt strokeWidth
omero.RString fontFamily
omero.RInt fontSize
omero.RString fontStretch
omero.RString fontStyle
omero.RString fontVariant
omero.RString fontWeight
omero.RInt version
omero.RString status
omero.RInt column
omero.RInt row
omero.RInt red
omero.RInt green
omero.RInt blue
omero.RInt alpha
java.util.List<E> reagentLinksSeq
boolean reagentLinksLoaded
java.util.Map<K,V> reagentLinksCountPerOwner
omero.RString externalDescription
omero.RString externalIdentifier
omero.RString type
java.util.List<E> wellSamplesSeq
boolean wellSamplesLoaded
omero.model.Plate plate
java.util.List<E> annotationLinksSeq
boolean annotationLinksLoaded
java.util.Map<K,V> annotationLinksCountPerOwner
omero.RInt version
omero.RDouble posX
omero.RDouble posY
omero.RTime timepoint
omero.model.PlateAcquisition plateAcquisition
omero.model.Well well
omero.model.Image image
java.util.List<E> annotationLinksSeq
boolean annotationLinksLoaded
java.util.Map<K,V> annotationLinksCountPerOwner
long shareId
long sessionId
java.lang.String sessionUuid
long userId
java.lang.String userName
long groupId
java.lang.String groupName
boolean isAdmin
long eventId
java.lang.String eventType
java.util.List<E> memberOfGroups
java.util.List<E> leaderOfGroups
omero.model.Permissions groupPermissions
long rootId
java.lang.String rootName
long systemGroupId
java.lang.String systemGroupName
long userGroupId
java.lang.String userGroupName
long guestId
java.lang.String guestName
long guestGroupId
java.lang.String guestGroupName
java.util.concurrent.atomic.AtomicLong loadCount
java.util.concurrent.atomic.AtomicLong fetchCount
java.util.concurrent.atomic.AtomicLong updateCount
java.util.concurrent.atomic.AtomicLong removeCount
java.util.concurrent.atomic.AtomicLong recreateCount
java.util.concurrent.atomic.AtomicLong loadCount
java.util.concurrent.atomic.AtomicLong updateCount
java.util.concurrent.atomic.AtomicLong insertCount
java.util.concurrent.atomic.AtomicLong deleteCount
java.util.concurrent.atomic.AtomicLong fetchCount
java.util.concurrent.atomic.AtomicLong optimisticFailureCount
java.util.concurrent.atomic.AtomicLong cacheHitCount
java.util.concurrent.atomic.AtomicLong cacheMissCount
java.util.concurrent.atomic.AtomicLong cachePutCount
java.util.concurrent.atomic.AtomicLong executionCount
java.util.concurrent.atomic.AtomicLong executionRowCount
java.util.concurrent.atomic.AtomicLong executionMaxTime
java.util.concurrent.atomic.AtomicLong executionMinTime
java.util.concurrent.atomic.AtomicLong totalExecutionTime
java.util.concurrent.locks.Lock readLock
java.util.concurrent.locks.Lock writeLock
long cacheHitCount
long cacheMissCount
long cachePutCount
long executionCount
long executionRowCount
long executionAvgTime
long executionMaxTime
long executionMinTime