<?xml version="1.0" encoding="UTF-8"?>
<pdpml version="1.0" xmlns="http://ssbd.qbic.riken.jp/pdpml" xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:schemaLocation="http://ssbd.qbic.riken.jp/pdpml http://ssbd.qbic.riken.jp/pdpml/pdpml1.0.xsd">
<info>
	<pdpmlID>8f94272d-6ede-4a57-b7ca-02e4604fbcab</pdpmlID>
	<title>File of the procedures for data processing to obtain single molecule dynamics</title>
	<release>2017-10-03</release>
</info>
<summary>
	<description>Method for obtaining single molecule division dynamics</description>
	<contributors>
		<person>
			<first-name>Takeshi</first-name>
			<last-name>Jin</last-name>
		</person>
	</contributors>
</summary>
<contact>
	<person>
		<first-name>Takashi</first-name>
		<last-name>Jin</last-name>
		<affiliation>
			<E-mail>tjin@riken.jp</E-mail>
			<organization>RIKEN</organization>
			<department>Quantitative Biology Center</department>
			<laboratory>Laboratory for Nano-Bio Probes</laboratory>
			<address>6-2-3 Furuedai, Suita, Osaka 565-0874, Japan</address>
		</affiliation>
	</person>
</contact>
<procedure>
	<description>We first automtically detected and tracked fluorescent spots (step order=1). We manually corrected some errors (step order=2).</description>
	<step name="determination process of initial threshold" order="1">
		<annotation>extraction and tracking of fluorescent spot</annotation>
		<program>
			<name>G-Track ver 1.2</name>
			<url>http://www.g-angstrom.com/products/gtrack.php</url>
			<description>Automatically recognizes all the fluorescent spots in a movie. All position and tracking information of the fluorescent spots were obtained by by Gaussian fitting mode. List of parameters: iteration number for iteration fitting algorithm, ROI size, minimum number of frames for tracing, fluorescent intensity threshold, frame number, and fluorescent intensity (absolute values and background subtraction))</description>
		</program>
	</step>
	<step name="manual error correction" order="2">
		<annotation>manual correction of some errors</annotation>
		<program>
			<name>remove false-positives editor</name>
			<description>Removed false-positive information was saved.</description>
		</program>
	</step>
</procedure>
</pdpml>
